RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 VWA8A3KMH1 1905 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 SHISA7A6NL88 538 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 H3BQV1 296 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 PPEF2O14830 753 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 FAM189A1O60320 539 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 TOM1L1O75674 476 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 VNN2O95498 520 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 DCNP07585 359 aaKnown RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 HNRNPA1P09651 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 SRFP11831 508 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 HOXA9P31269 272 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 CCR2P41597 374 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 NUBP1P53384 320 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 YARSP54577 528 aaKnown RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 NCKAP1LP55160 1127 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 ARPP19P56211 112 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 CREMQ03060 361 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 MCL1Q07820 350 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 DHX8Q14562 1220 aaKnown RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 MCM6Q14566 821 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 KARSQ15046 597 aaKnown RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 SPECC1Q5M775 1068 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 ARL6IP4Q66PJ3 421 aaKnown RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 FAM173BQ6P4H8 233 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 SLC39A4Q6P5W5 647 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 CCDC105Q8IYK2 499 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 DTWD2Q8NBA8 298 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 ING5Q8WYH8 240 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 TCEAL4Q96EI5 215 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 UROC1Q96N76 676 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 DLGAP2Q9P1A6 1054 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
SRPRA-203ENST00000528744 MTF2Q9Y483 593 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 TIMM13Q9Y5L4 95 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-203ENST00000528744 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
SRPRA-203ENST00000528744 COL4A3Q01955 1670 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 LACTBL1A8MY62 500 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 TISP43B9A030 160 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 GFRA3O60609 400 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 MOSPD3O75425 235 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-203ENST00000528744 CXCL8P10145 99 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 NBL1P41271 181 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
SRPRA-203ENST00000528744 LIN9Q5TKA1 542 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 SCARA3Q6AZY7 606 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 ELMSAN1Q6PJG2 1045 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 ANKS3Q6ZW76 656 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 HAUS6Q7Z4H7 955 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 FRMD5Q7Z6J6 570 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 NPAS3Q8IXF0 933 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 ZNF461Q8TAF7 563 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 NXPE3Q969Y0 559 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 MCRS1Q96EZ8 462 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 SUSD3Q96L08 255 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 TIPINQ9BVW5 301 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 FOXQ1Q9C009 403 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 CRISPLD1Q9H336 500 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 TBC1D17Q9HA65 648 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 SLC2A4RGQ9NR83 387 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 CLIC4Q9Y696 253 aa12.62□□□□□ -0.39
SRPRA-203ENST00000528744 ARHGEF37A1IGU5 675 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 ANKRD63C9JTQ0 380 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 RHOP08100 348 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 POU2F2P09086 479 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 PLCG1P19174 1290 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
SRPRA-203ENST00000528744 RPL9P32969 192 aaKnown RBP12.61□□□□□ -0.39
SRPRA-203ENST00000528744 ZNF131P52739 623 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 SNW1Q13573 536 aaKnown RBP12.61□□□□□ -0.39
SRPRA-203ENST00000528744 CUL4AQ13619 759 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
SRPRA-203ENST00000528744 PTPAQ15257 358 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 ANGPT1Q15389 498 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 ENOX2Q16206 610 aaKnown RBP12.61□□□□□ -0.39
SRPRA-203ENST00000528744 PRSS36Q5K4E3 855 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 TANGO2Q6ICL3 276 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 ZPBP2Q6X784 338 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 GPBP1Q86WP2 473 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 DDX12PQ92771 950 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 KCNN1Q92952 543 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 EPSTI1Q96J88 318 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 ZSWIM3Q96MP5 696 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 TOPORSQ9NS56 1045 aaPredicted RBP12.61□□□□□ -0.39
SRPRA-203ENST00000528744 TRIP11Q15643 1979 aa12.61□□□□□ -0.39
SRPRA-203ENST00000528744 MTCL1Q9Y4B5 1905 aaKnown RBP12.6□□□□□ -0.39
SRPRA-203ENST00000528744 STK25O00506 426 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms