RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 L1TD1Q5T7N2 865 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 RESP18Q5W5W9 173 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 PRSS55Q6UWB4 352 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 CEP57Q86XR8 500 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 C12orf76Q8N812 135 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 DHX58Q96C10 678 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 UBQLN1Q9UMX0 589 aaKnown RBP13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 NR2E1Q9Y466 385 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 BACE2Q9Y5Z0 518 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
TRAPPC4-209ENST00000528230 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 LACTBL1A8MY62 500 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 SYN3O14994 580 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 POLR2DO15514 142 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 TGM5O43548 720 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 DCXO43602 365 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 GCNT3O95395 438 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 IGFBP6P24592 240 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 TNFSF9P41273 254 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 KRT85P78386 507 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 ADALQ6DHV7 355 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 ANKS3Q6ZW76 656 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 C18orf25Q96B23 403 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 RPGRIP1Q96KN7 1286 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 ASB7Q9H672 318 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 AGO2Q9UKV8 859 aaKnown RBP13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 DERAQ9Y315 318 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 DENND4AQ7Z401 1863 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 BDP1A6H8Y1 2624 aa13.18□□□□□ -0.3
TRAPPC4-209ENST00000528230 MYO10Q9HD67 2058 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 GPR37L1O60883 481 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 RPL17P18621 184 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 PAX3P23760 479 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 BRCC3P46736 316 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 RAB33AQ14088 237 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 RTL10Q7L3V2 364 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 LEO1Q8WVC0 666 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 STAMQ92783 540 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 POMKQ9H5K3 350 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 MTRRQ9UBK8 725 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 NUB1Q9Y5A7 615 aa13.17□□□□□ -0.3
TRAPPC4-209ENST00000528230 CCDC195A0A1B0GUA6 201 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 MYBP10242 640 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 GARTP22102 1010 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 CMA1P23946 247 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 TKTP29401 623 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 ADSSP30520 456 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 ACOT2P49753 483 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 CASP5P51878 434 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 ASIC1P78348 528 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 KCNA1Q09470 495 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 GLYCTKQ8IVS8 523 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 SYCP3Q8IZU3 236 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 PLCD3Q8N3E9 789 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 SPATA32Q96LK8 384 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 TUBGCP4Q9UGJ1 667 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 FBXW11Q9UKB1 542 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 C2CD2Q9Y426 696 aa13.16□□□□□ -0.3
TRAPPC4-209ENST00000528230 PVALEFA0A1B0GWK0 134 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 TISP43B9A030 160 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 H7C4K7 107 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 I3L4J1 428 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 M0QZQ0 153 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 EIF3DO15371 548 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 ZMYND10O75800 440 aa13.15□□□□□ -0.3
TRAPPC4-209ENST00000528230 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms