RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 KCNE1P15382 129 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 PROZP22891 400 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 GJB2P29033 226 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 SEZ6Q53EL9 994 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 PHLDB3Q6NSJ2 640 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 SYT2Q8N9I0 419 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 SPIRE2Q8WWL2 714 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 ING5Q8WYH8 240 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 C18orf25Q96B23 403 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 SHDQ96IW2 340 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 PNMA5Q96PV4 448 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 CITO14578 2027 aa24.47■■□□□ 1.51
TRAPPC4-208ENST00000527680 H7C4K7 107 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 CLDN3O15551 220 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 TOM1L1O75674 476 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 PLA2G4BP0C869 781 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 NOLC1Q14978 699 aaKnown RBP eCLIP24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 KCTD17Q8N5Z5 321 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 BICD1Q96G01 975 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 CNTN3Q9P232 1028 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 KCNH3Q9ULD8 1083 aa24.46■■□□□ 1.51
TRAPPC4-208ENST00000527680 POU2F2P09086 479 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 PTPN2P17706 415 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 MCM4P33991 863 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 ROR1Q01973 937 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 SNW1Q13573 536 aaKnown RBP24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 HYIQ5T013 277 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 TMEM161BQ8NDZ6 487 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 MCRS1Q96EZ8 462 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 KXD1Q9BQD3 176 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 UPF2Q9HAU5 1272 aaKnown RBP24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 CYP4F11Q9HBI6 524 aa24.45■■□□□ 1.5
TRAPPC4-208ENST00000527680 NPHP3-ACAD11A0A0J9YXS1 232 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 ABLIM1O14639 778 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 SYN3O14994 580 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 RHOP08100 348 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 MAPTP10636 758 aaKnown RBP24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 MARCKSP29966 332 aaPredicted RBP24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 CACNB1Q02641 598 aaPredicted RBP24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 SLC10A6Q3KNW5 377 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 CTXN3Q4LDR2 81 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 ARL6IP4Q66PJ3 421 aaKnown RBP24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 SLC8B1Q6J4K2 584 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 KCNG4Q8TDN1 519 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 KCND2Q9NZV8 630 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 LARSQ9P2J5 1176 aaKnown RBP24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 SMC3Q9UQE7 1217 aa24.44■■□□□ 1.5
TRAPPC4-208ENST00000527680 ABLIM3O94929 683 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 SLC12A3P55017 1021 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 DHX8Q14562 1220 aaKnown RBP24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 SLC44A4Q53GD3 710 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 ZPBP2Q6X784 338 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 NPAS3Q8IXF0 933 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 APPL2Q8NEU8 664 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 CALML4Q96GE6 196 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 FOXQ1Q9C009 403 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 MYH15Q9Y2K3 1946 aa24.43■■□□□ 1.5
TRAPPC4-208ENST00000527680 RIF1Q5UIP0 2472 aaKnown RBP24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 WDR27A2RRH5 827 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 H0YCG3 227 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 ATF2P15336 505 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 UBA7P41226 1012 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 PFKPQ01813 784 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 SPAG1Q07617 926 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 LARP1BQ659C4 914 aaKnown RBP24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 TBC1D32Q96NH3 1257 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 CORO1BQ9BR76 489 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 FBXL5Q9UKA1 691 aa24.42■■□□□ 1.5
TRAPPC4-208ENST00000527680 NOTCH4Q99466 2003 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 ARHGEF37A1IGU5 675 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 STARD6P59095 220 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 HAUS6Q7Z4H7 955 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 ADSSL1Q8N142 457 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 ELMOD1Q8N336 334 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 RASSF8Q8NHQ8 419 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 SUSD3Q96L08 255 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 GDE1Q9NZC3 331 aa24.41■■□□□ 1.5
TRAPPC4-208ENST00000527680 CLTAP09496 248 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 CXCL8P10145 99 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 MCM2P49736 904 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 LIG4P49917 911 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 MCL1Q07820 350 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 MRPL58Q14197 206 aaKnown RBP24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 MLF2Q15773 248 aaPredicted RBP24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 ARSHQ5FYA8 562 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 TPGS2Q68CL5 300 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 ZNF280DQ6N043 979 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 C1orf210Q8IVY1 113 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 TCEAL8Q8IYN2 117 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 MYCT1Q8N699 235 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 PJA1Q8NG27 643 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 DDX12PQ92771 950 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 KIF12Q96FN5 646 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 AK8Q96MA6 479 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 ZHX3Q9H4I2 956 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 PLEKHA5Q9HAU0 1116 aa24.4■■□□□ 1.5
TRAPPC4-208ENST00000527680 KANSL1LA0AUZ9 987 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 ZNF197O14709 1029 aa24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 MEFVO15553 781 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC4-208ENST00000527680 TBC1D4O60343 1298 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms