RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 WDR48Q8TAF3 677 aa7.61□□□□□ -1.19
CTNND1-216ENST00000527467 NRBP1Q9UHY1 535 aa7.61□□□□□ -1.19
CTNND1-216ENST00000527467 ATP6V1HQ9UI12 483 aa7.61□□□□□ -1.19
CTNND1-216ENST00000527467 RABGEF1Q9UJ41 708 aa7.61□□□□□ -1.19
CTNND1-216ENST00000527467 SH3GLB1Q9Y371 365 aa7.61□□□□□ -1.19
CTNND1-216ENST00000527467 PCDHGA3Q9Y5H0 932 aa7.61□□□□□ -1.19
CTNND1-216ENST00000527467 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 GOLGA8SH3BPF8 625 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 POLRMTO00411 1230 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 SRP72O76094 671 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 PHKA1P46020 1223 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ABATP80404 500 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ARF5P84085 180 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 TNFAIP2Q03169 654 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 POU5F1BQ06416 359 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 LRRC74AQ0VAA2 488 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ATP1A4Q13733 1029 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 SPDYE7PQ495Y7 208 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 FAM26FQ5R3K3 315 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 REXO1Q8N1G1 1221 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ZNF786Q8N393 782 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 PCYOX1LQ8NBM8 494 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 CNOT6LQ96LI5 555 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 EGFL8Q99944 293 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 TRIM54Q9BYV2 358 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ANAPC7Q9UJX3 599 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 SHPRHQ149N8 1683 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 MED7O43513 233 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ENO1P06733 434 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 MAPKAPK2P49137 400 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ZNF618Q5T7W0 954 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 FOXP4Q8IVH2 680 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 NUP93Q8N1F7 819 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 GLG1Q92896 1179 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ZNF274Q96GC6 653 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ATP6V1G3Q96LB4 118 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 USP28Q96RU2 1077 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 MEIS3Q99687 375 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 APOL4Q9BPW4 351 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 STK39Q9UEW8 545 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 C19orf81C9J6K1 198 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 COBLO75128 1261 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 SRGNP10124 158 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 MARK3P27448 753 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 TCP10Q12799 353 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 STXBP2Q15833 593 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 PDZK1Q5T2W1 519 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 CC2D1AQ6P1N0 951 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 PGBD2Q6P3X8 592 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 PKN3Q6P5Z2 889 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 SOCS4Q8WXH5 440 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ARL8AQ96BM9 186 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 AP1M1Q9BXS5 423 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 GCOM2Q9BZD3 368 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 NRDE2Q9H7Z3 1164 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 AVENQ9NQS1 362 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 TJP3O95049 919 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 FDX1P10109 184 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ITPK1Q13572 414 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 BNIPLQ7Z465 357 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 NLRP10Q86W26 655 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 TTC13Q8NBP0 860 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 MOV10L1Q9BXT6 1211 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 RANBP17Q9H2T7 1088 aaKnown RBP7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ZBTB40Q9NUA8 1239 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 ETAA1Q9NY74 926 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 SENP1Q9P0U3 644 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 KLHL3Q9UH77 587 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 LRP6O75581 1613 aa7.6□□□□□ -1.19
CTNND1-216ENST00000527467 PNMA8CA0A1B0GUJ8 204 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 MBD4O95243 580 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 CMA1P23946 247 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 EPS8Q12929 822 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 C6orf10Q5SRN2 563 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 UBE2Q1Q7Z7E8 422 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SLC17A8Q8NDX2 589 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 UBASH3BQ8TF42 649 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 CAPSLQ8WWF8 208 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 FAM162AQ96A26 154 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 MRPL48Q96GC5 212 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 RNF208Q9H0X6 261 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 MAGEF1Q9HAY2 307 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 NCOA5Q9HCD5 579 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SPTLC3Q9NUV7 552 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SNX24Q9Y343 169 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 LTBP3Q9NS15 1303 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SMIM31A0A1B0GVY4 71 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 PSMD14O00487 310 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 AHCYL1O43865 530 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 APOA4P06727 396 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ENO3P13929 434 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 CCT8P50990 548 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SCNN1DP51172 638 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 DSG1Q02413 1049 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SUZ12Q15022 739 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 TMA16Q96EY4 203 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ANKRD27Q96NW4 1050 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms