RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 VIMP08670 466 aaKnown RBP12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 KCNA2P16389 499 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 CHKAP35790 457 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 ZBTB41Q5SVQ8 909 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 TRAPPC12Q8WVT3 735 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 SEC14L1Q92503 715 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 SHC3Q92529 594 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.365e-7■■□□□ 13.9
CHMP1B-201ENST00000526991 MRRFQ96E11 262 aaKnown RBP12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 SLC9A2Q9UBY0 812 aa12.77□□□□□ -0.36
CHMP1B-201ENST00000526991 CHRNA3P32297 505 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 SUPT20HL1Q3ZLR7 823 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 CAPN12Q6ZSI9 719 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 MICALCLQ6ZW33 695 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 CEP89Q96ST8 783 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 C11orf70Q9BRQ4 267 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 MTUS1Q9ULD2 1270 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 R3HDM2Q9Y2K5 976 aaKnown RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 CDR1P51861 262 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 RWDD2BP57060 319 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 CDR2Q01850 454 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 KRT17Q04695 432 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 DHX34Q14147 1143 aaKnown RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 C11orf63Q6NUN7 778 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 LRRC71Q8N4P6 559 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 TAB3Q8N5C8 712 aaPredicted RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 OSBPL7Q9BZF2 842 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 RPS6KL1Q9Y6S9 549 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.37
CHMP1B-201ENST00000526991 FAM187AA6NFU0 413 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 A6NNZ2 444 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 PI4K2BG5E9Z4 385 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 DNM1LO00429 736 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 OSTNP61366 133 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 TUBB8Q3ZCM7 444 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 KAZNQ674X7 775 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 CCDC13Q8IYE1 715 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 CACNA2D3Q8IZS8 1091 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 XPO6Q96QU8 1125 aaKnown RBP12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 TXLNGYQ9BZA5 131 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 POLR3FQ9H1D9 316 aaPredicted RBP12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 HTTP42858 3142 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 ECEL1O95672 775 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 CD58P19256 250 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 POLGP54098 1239 aaPredicted RBP12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 MTM1Q13496 603 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 KYNUQ16719 465 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 HOOK3Q86VS8 718 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 EIF1ADQ8N9N8 165 aaKnown RBP12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 WNT8AQ9H1J5 351 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 KCNK9Q9NPC2 374 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 XPNPEP1Q9NQW7 623 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
CHMP1B-201ENST00000526991 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 MUTP22033 750 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 CTNNA2P26232 953 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 NCKAP1LP55160 1127 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 NLRP11P59045 1033 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 IGBP1P78318 339 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 KRT76Q01546 638 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 ATP13A4Q4VNC1 1196 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 FBXO16Q8IX29 292 aaPredicted RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 C4orf19Q8IY42 314 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 LRRC34Q8IZ02 419 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 GDAP1Q8TB36 358 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 CCDC97Q96F63 343 aaPredicted RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 SYT17Q9BSW7 474 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 TMEM8AQ9HCN3 771 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 CD248Q9HCU0 757 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 INTS9Q9NV88 658 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 DIS3Q9Y2L1 958 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 RASGRF2O14827 1237 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 SRGAP2CP0DJJ0 459 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 ATP4AP20648 1035 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 PSMC4P43686 418 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 FNTAP49354 379 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 ZBTB33Q86T24 672 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 DYDC1Q8WWB3 177 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 CD101Q93033 1021 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 FNBP1Q96RU3 617 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
CHMP1B-201ENST00000526991 HAUS2Q9NVX0 235 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms