RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 A0A1W2PQY0 241 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 NFICP08651 508 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 YARSP54577 528 aaKnown RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 TRPC3Q13507 836 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 TMEM132DQ14C87 1099 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 TRIM71Q2Q1W2 868 aaKnown RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 UBXN11Q5T124 520 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 JADE1Q6IE81 842 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 GPIHBP1Q8IV16 184 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 KIF18AQ8NI77 898 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 SNX27Q96L92 541 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 EIF2AQ9BY44 585 aaKnown RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 TRIM6Q9C030 488 aaPredicted RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 APOBEC3GQ9HC16 384 aaKnown RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 PAK6Q9NQU5 681 aaPredicted RBP22.05■■□□□ 1.12
SMCO4-203ENST00000526869 ADAMTS1Q9UHI8 967 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 SQORQ9Y6N5 450 aa22.05■■□□□ 1.12
SMCO4-203ENST00000526869 CITO14578 2027 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 KBTBD13C9JR72 458 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 RPS6KA5O75582 802 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 CHRNA1P02708 482 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 NAB2Q15742 525 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 CCDC122Q5T0U0 273 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 SLC30A5Q8TAD4 765 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 OLIG1Q8TAK6 271 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 SH3TC2Q8TF17 1288 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.04■■□□□ 1.12
SMCO4-203ENST00000526869 NIF3L1Q9GZT8 377 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 NAGPAQ9UK23 515 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 ITGA11Q9UKX5 1188 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 CNTN6Q9UQ52 1028 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 NOD1Q9Y239 953 aa22.04■■□□□ 1.12
SMCO4-203ENST00000526869 A0A0U1RQJ8 604 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 DNM1LO00429 736 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 DDX3XO00571 662 aaKnown RBP eCLIP22.03■■□□□ 1.124e-7■■■■■ 34.2
SMCO4-203ENST00000526869 GPR182O15218 404 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 STAU1O95793 577 aaKnown RBP22.03■■□□□ 1.12
SMCO4-203ENST00000526869 CST3P01034 146 aaPredicted RBP22.03■■□□□ 1.12
SMCO4-203ENST00000526869 ATICP31939 592 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 BPIFB4P59827 614 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 MYL6P60660 151 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 GNG11P61952 73 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 SYT10Q6XYQ8 523 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 C1orf127Q8N9H9 656 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 ATRIPQ8WXE1 791 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 AGPAT1Q99943 283 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 XYLT2Q9H1B5 865 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 UNC93B1Q9H1C4 597 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 VRTNQ9H8Y1 702 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 SNTG2Q9NY99 539 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 CNTN3Q9P232 1028 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 NOCTQ9UK39 431 aaKnown RBP22.03■■□□□ 1.12
SMCO4-203ENST00000526869 INTUQ9ULD6 942 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 NUB1Q9Y5A7 615 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 HTTP42858 3142 aa22.03■■□□□ 1.12
SMCO4-203ENST00000526869 RCCD1A6NED2 376 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 ACO1P21399 889 aaKnown RBP22.02■■□□□ 1.12
SMCO4-203ENST00000526869 THPOP40225 353 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 ZNF699Q32M78 642 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 XKR4Q5GH76 650 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 SPOPLQ6IQ16 392 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 ALKAL1Q6UXT8 129 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 UBR7Q8N806 425 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 USP38Q8NB14 1042 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 CXorf38Q8TB03 319 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 EPS8L1Q8TE68 723 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 LACRTQ9GZZ8 138 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.02■■□□□ 1.12
SMCO4-203ENST00000526869 STARD7Q9NQZ5 370 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 SIX4Q9UIU6 781 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 ST3GAL5Q9UNP4 418 aa22.02■■□□□ 1.12
SMCO4-203ENST00000526869 BTNL10A8MVZ5 291 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 ARVCFO00192 962 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 CTSHP09668 335 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 TNFAIP3P21580 790 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 USP8P40818 1118 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 YWHAEP62258 255 aaKnown RBP22.01■■□□□ 1.11
SMCO4-203ENST00000526869 ZBTB6Q15916 424 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 FBXO47Q5MNV8 452 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 ALKBH5Q6P6C2 394 aaKnown RBP22.01■■□□□ 1.11
SMCO4-203ENST00000526869 ZNF677Q86XU0 584 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 LNX1Q8TBB1 728 aaPredicted RBP22.01■■□□□ 1.11
SMCO4-203ENST00000526869 NXF3Q9H4D5 531 aaKnown RBP22.01■■□□□ 1.11
SMCO4-203ENST00000526869 FAM124BQ9H5Z6 455 aaPredicted RBP22.01■■□□□ 1.11
SMCO4-203ENST00000526869 ERVK-5Q9HDB9 667 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 TRMT13Q9NUP7 481 aaKnown RBP22.01■■□□□ 1.11
SMCO4-203ENST00000526869 DNAI1Q9UI46 699 aa22.01■■□□□ 1.11
SMCO4-203ENST00000526869 CYP26A1O43174 497 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 RECQL4O94761 1208 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 KCNE1P15382 129 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 PDE6CP51160 858 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 HACE1Q8IYU2 909 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 KIF12Q96FN5 646 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 TRAIPQ9BWF2 469 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 DPP3Q9NY33 737 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 GUCA1BQ9UMX6 200 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 PCDHB2Q9Y5E7 798 aa22■■□□□ 1.11
SMCO4-203ENST00000526869 PDCD11Q14690 1871 aaKnown RBP22■■□□□ 1.11
SMCO4-203ENST00000526869 SGPL1O95470 568 aa21.99■■□□□ 1.11
SMCO4-203ENST00000526869 ITGB3P05106 788 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms