RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 TEX51A0A1B0GUA7 166 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 NKRFO15226 690 aaKnown RBP eCLIP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 GREM1O60565 184 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 PRDM1O75626 825 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 ATE1O95260 518 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 GLP2RO95838 553 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 CHGBP05060 677 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 POLR2BP30876 1174 aaKnown RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 EIF4A3P38919 411 aaKnown RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 STAT2P52630 851 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 ATP8B2P98198 1209 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 RBL2Q08999 1139 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 SNW1Q13573 536 aaKnown RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 TTF1Q15361 905 aaPredicted RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 KIAA0753Q2KHM9 967 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 TMED8Q6PL24 325 aaPredicted RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 SEPT14Q6ZU15 432 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 KCTD1Q719H9 257 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 NLRX1Q86UT6 975 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 SESTD1Q86VW0 696 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 FAM9BQ8IZU0 186 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 DAGLBQ8NCG7 672 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 SPPL3Q8TCT6 385 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 PPP2R3CQ969Q6 453 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 TCTN2Q96GX1 697 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 DNAJC2Q99543 621 aaKnown RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 MTMR4Q9NYA4 1195 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 ZMYM5Q9UJ78 669 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 CCPG1Q9ULG6 757 aa6.3□□□□□ -1.4
SF3B2-205ENST00000526653 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 FASNP49327 2511 aaKnown RBP6.3□□□□□ -1.4
SF3B2-205ENST00000526653 EMSYQ7Z589 1322 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 ENPP3O14638 875 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 MMP1P03956 469 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 ITGB1P05556 798 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 ASGR2P07307 311 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 MMP3P08254 477 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 LINC00271P0C7V0 271 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 ATF7P17544 494 aaPredicted RBP6.29□□□□□ -1.4
SF3B2-205ENST00000526653 SLC1A4P43007 532 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 PLXNA3P51805 1871 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 ATXN1P54253 815 aaKnown RBP6.29□□□□□ -1.4
SF3B2-205ENST00000526653 OVOS1Q6IE37 1185 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 AACSQ86V21 672 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 FAM160B2Q86V87 743 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 RPAP2Q8IXW5 612 aaPredicted RBP6.29□□□□□ -1.4
SF3B2-205ENST00000526653 UBALD2Q8IYN6 164 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 ZNF655Q8N720 491 aaPredicted RBP6.29□□□□□ -1.4
SF3B2-205ENST00000526653 POF1BQ8WVV4 589 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 SUSD6Q92537 303 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 CEP95Q96GE4 821 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 MAP6Q96JE9 813 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 HAUS7Q99871 368 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 TCFL5Q9UL49 500 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 SORCS3Q9UPU3 1222 aa6.29□□□□□ -1.4
SF3B2-205ENST00000526653 MAP1BP46821 2468 aaKnown RBP6.28□□□□□ -1.4
SF3B2-205ENST00000526653 MCM3APO60318 1980 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 IGKV6D-41A0A0C4DH26 115 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 OR14I1A6ND48 311 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 TTLL1O95922 423 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 GH1P01241 217 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 ZNF286BP0CG31 522 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 SLC16A2P36021 539 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 TECP42680 631 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 PCBP3P57721 371 aaKnown RBP6.28□□□□□ -1.4
SF3B2-205ENST00000526653 ARHGAP1Q07960 439 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 DGKDQ16760 1214 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 ADGRF1Q5T601 910 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 CDCP2Q5VXM1 449 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 RCSD1Q6JBY9 416 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 CCDC62Q6P9F0 684 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 ZPBP2Q6X784 338 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 SLC30A10Q6XR72 485 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 RNF207Q6ZRF8 634 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 GMCL1P1Q8NEA9 526 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 VN1R2Q8NFZ6 395 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 SSH3Q8TE77 659 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 RIN2Q8WYP3 895 aaPredicted RBP6.28□□□□□ -1.4
SF3B2-205ENST00000526653 RUBCNQ92622 972 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 ATP6V0A1Q93050 837 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 S1PR5Q9H228 398 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 SEMA4AQ9H3S1 761 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 CDH22Q9UJ99 828 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 CNOT6Q9ULM6 557 aaKnown RBP6.28□□□□□ -1.4
SF3B2-205ENST00000526653 TNNQ9UQP3 1299 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 RWDD3Q9Y3V2 267 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 COL4A4P53420 1690 aaPredicted RBP6.28□□□□□ -1.4
SF3B2-205ENST00000526653 MYH1P12882 1939 aa6.28□□□□□ -1.4
SF3B2-205ENST00000526653 COL11A1P12107 1806 aaPredicted RBP6.27□□□□□ -1.41
SF3B2-205ENST00000526653 USP24Q9UPU5 2620 aa6.27□□□□□ -1.41
SF3B2-205ENST00000526653 SSU72P8A0A1W2PR75 194 aa6.27□□□□□ -1.41
SF3B2-205ENST00000526653 C2CD4DB7Z1M9 353 aa6.27□□□□□ -1.41
SF3B2-205ENST00000526653 NRDCO43847 1150 aa6.27□□□□□ -1.41
SF3B2-205ENST00000526653 PRAMEF1O95521 474 aa6.27□□□□□ -1.41
SF3B2-205ENST00000526653 ICAM1P05362 532 aa6.27□□□□□ -1.41
SF3B2-205ENST00000526653 SYPP08247 313 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms