RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 CTSAP10619 480 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 CYP3A5P20815 502 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 CA8P35219 290 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 DLX2Q07687 328 aaPredicted RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 TMEM132DQ14C87 1099 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 PTPN14Q15678 1187 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 CAMK4Q16566 473 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 SPATA1Q5VX52 437 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 ISM2Q6H9L7 571 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 C12orf56Q8IXR9 622 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 GUF1Q8N442 669 aaKnown RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 DDX27Q96GQ7 796 aaKnown RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 TSPAN18Q96SJ8 248 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 ASB7Q9H672 318 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 TLE6Q9H808 572 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 MAN1B1Q9UKM7 699 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 DERAQ9Y315 318 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 I3L4J1 428 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 PDXKO00764 312 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 PPEF2O14830 753 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 LILRB3O75022 631 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 TBX10O75333 385 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 GLP2RO95838 553 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 LRPAP1P30533 357 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 LTBRP36941 435 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 PRCPP42785 496 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 SNRNP35Q16560 246 aaKnown RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 DUSP6Q16828 381 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 CTC1Q2NKJ3 1217 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 ZNF658Q5TYW1 1059 aaPredicted RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 KIAA0319Q5VV43 1072 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTTN-210ENST00000525852 XXYLT1Q8NBI6 393 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 GOLGA5Q8TBA6 731 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 HLA-CQ95604 372 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 UBE2ZQ9H832 354 aaPredicted RBP13.36□□□□□ -0.27
CTTN-210ENST00000525852 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 CHST7Q9NS84 486 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 STK39Q9UEW8 545 aa13.36□□□□□ -0.27
CTTN-210ENST00000525852 TCF20Q9UGU0 1960 aaKnown RBP13.35□□□□□ -0.27
CTTN-210ENST00000525852 SF3B1O75533 1304 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■■■■■ 178.9
CTTN-210ENST00000525852 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
CTTN-210ENST00000525852 H3BQ06 376 aaPredicted RBP13.35□□□□□ -0.27
CTTN-210ENST00000525852 BIN1O00499 593 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 KIF20AO95235 890 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 NR3C1P04150 777 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 BMP6P22004 513 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 KCNA5P22460 613 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 BRCC3P46736 316 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 GLUD2P49448 558 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 DSG1Q02413 1049 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 USP41Q3LFD5 358 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 EP400NLQ6ZTU2 488 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 TMEM174Q8WUU8 243 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 PABPC5Q96DU9 382 aaKnown RBP13.35□□□□□ -0.27
CTTN-210ENST00000525852 CLSTN2Q9H4D0 955 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 KIAA1586Q9HCI6 787 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 THEGQ9P2T0 379 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 TRAF3IP3Q9Y228 551 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 IRAK3Q9Y616 596 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
CTTN-210ENST00000525852 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 EXOC3O60645 756 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 CLASP2O75122 1294 aaKnown RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 URODP06132 367 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 CASP4P49662 377 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 ADAM15Q13444 863 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 MORC3Q14149 939 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 SLC9A9Q8IVB4 645 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 EFHBQ8N7U6 833 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 GPT2Q8TD30 523 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
CTTN-210ENST00000525852 GZF1Q9H116 711 aaPredicted RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
CTTN-210ENST00000525852 DPP3Q9NY33 737 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms