RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ANGPTL3Q9Y5C1 460 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CYP46A1Q9Y6A2 500 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 PIK3R4Q99570 1358 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 FANCD2Q9BXW9 1451 aa4.9□□□□□ -1.62
CD44-213ENST00000525209 A0A0B4J203 849 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 FAM234BA2RU67 622 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 ARNTLO00327 626 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SH2B2O14492 632 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 CASQ2O14958 399 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 ZBTB43O43298 467 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SGTAO43765 313 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 KLHL41O60662 606 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 TBX10O75333 385 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SEC22BO75396 215 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 STAM2O75886 525 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SMNDC1O75940 238 aaKnown RBP eCLIP4.9□□□□□ -1.63
CD44-213ENST00000525209 KIAA0754O94854 1291 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 FTLP02792 175 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 CHGBP05060 677 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 ITGB2P05107 769 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SNRNP70P08621 437 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 BRAFP15056 766 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 KRT2P35908 639 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 DPP6P42658 865 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 AFF1P51825 1210 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 KIF11P52732 1056 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 RAD23AP54725 363 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 BCAR1P56945 870 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 DMTNQ08495 405 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 EPS8Q12929 822 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 STK4Q13043 487 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 MAMLD1Q13495 774 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 PRPF4BQ13523 1007 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 IKBKEQ14164 716 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 PUM1Q14671 1186 aaKnown RBP eCLIP4.9□□□□□ -1.63
CD44-213ENST00000525209 LBRQ14739 615 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 RABEP1Q15276 862 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SEC23AQ15436 765 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 RAB30Q15771 203 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 KYNUQ16719 465 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 KIZQ2M2Z5 673 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 DUSP28Q4G0W2 176 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 NOL9Q5SY16 702 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 ZBTB37Q5TC79 503 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 CEP135Q66GS9 1140 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 CIAPIN1Q6FI81 312 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SHQ1Q6PI26 577 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 SLC22A25Q6T423 547 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 FIP1L1Q6UN15 594 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 SZRD1Q7Z422 152 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 ZNF804AQ7Z570 1209 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 RAB11FIP4Q86YS3 637 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 ZZZ3Q8IYH5 903 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 THNSL1Q8IYQ7 743 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 OXR1Q8N573 874 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 BEND7Q8N7W2 519 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 Q8NFD4 153 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 IL17RDQ8NFM7 739 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 NPLOC4Q8TAT6 608 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SH3RF3Q8TEJ3 882 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 AFG1LQ8WV93 481 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 EDARADDQ8WWZ3 215 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 COPS5Q92905 334 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 RGMAQ96B86 450 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 FAM120BQ96EK7 910 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 ZNF764Q96H86 408 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 NOX5Q96PH1 765 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 TWNKQ96RR1 684 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 EIF2AQ9BY44 585 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 TRIM5Q9C035 493 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 RNPEPQ9H4A4 650 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 RPAP3Q9H6T3 665 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 IPPKQ9H8X2 491 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 MLXIPQ9HAP2 919 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SP110Q9HB58 689 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 ERVK-5Q9HDB9 667 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 PAPOLBQ9NRJ5 636 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 SEPT11Q9NVA2 429 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 ZNF624Q9P2J8 865 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 HECAQ9UBI9 543 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 TBX20Q9UMR3 447 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 SCAF8Q9UPN6 1271 aaKnown RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
CD44-213ENST00000525209 IRS2Q9Y4H2 1338 aa4.9□□□□□ -1.63
CD44-213ENST00000525209 WIZO95785 1651 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CHD1O14646 1710 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ARHGEF11O15085 1522 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 RUSC2Q8N2Y8 1516 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 NEURL1BA8MQ27 555 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ZBTB42B2RXF5 422 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 PODXLO00592 558 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 KIAA0355O15063 1070 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ATXN7O15265 892 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 SLC16A6O15403 523 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 MEFVO15553 781 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 ASAP2O43150 1006 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 EFSO43281 561 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 SART1O43290 800 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 SYNCRIPO60506 623 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms