RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 NEMP1O14524 444 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 PRAMEF4O60810 478 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 ZFPL1O95159 310 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 MATN4O95460 622 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 HKR1P10072 659 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 HSP90B1P14625 803 aaKnown RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 XPAP23025 273 aaPredicted RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 MGAT1P26572 445 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 CANXP27824 592 aaKnown RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 SCNN1BP51168 640 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 USP14P54578 494 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 MRPS21P82921 87 aaKnown RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 OCRLQ01968 901 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 GUCY1B3Q02153 619 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 NHLH1Q02575 133 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 OCA2Q04671 838 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 FOXF2Q12947 444 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 RESTQ13127 1097 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 DDB1Q16531 1140 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 ZNF772Q68DY9 489 aaPredicted RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 EFCAB12Q6NXP0 572 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 RD3Q7Z3Z2 195 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 GLCCI1Q86VQ1 547 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 OR7D4Q8NG98 312 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 OR56A1Q8NGH5 318 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 OR2W6PQ8NHA6 318 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 ZNF480Q8WV37 535 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 UBXN4Q92575 508 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 APPBP2Q92624 585 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 TFAP2CQ92754 450 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 CDC5LQ99459 802 aaKnown RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 EPC1Q9H2F5 836 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 VTA1Q9NP79 307 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 TMEM74BQ9NUR3 256 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 RGS17Q9UGC6 210 aaPredicted RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 SLC23A1Q9UHI7 598 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 HDAC5Q9UQL6 1122 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 PLAAQ9Y263 795 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 USP15Q9Y4E8 981 aaPredicted RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 CLIP1P30622 1438 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 TROQ12816 1431 aaPredicted RBP2.47□□□□□ -2.01
CD44-212ENST00000524922 NWD1Q149M9 1564 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.47□□□□□ -2.01
CD44-212ENST00000524922 JCADQ9P266 1359 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 SLIT1O75093 1534 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 LRP5O75197 1615 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 DNMT1P26358 1616 aaKnown RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 NHSL1Q5SYE7 1610 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 ARHGAP23Q9P227 1491 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 RPTORQ8N122 1335 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 NPHP4O75161 1426 aaPredicted RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 DCCP43146 1447 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 CGB1A6NKQ9 187 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 RBMXL2O75526 392 aaKnown RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 ENPP1P22413 925 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 SREBF1P36956 1147 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 SLC6A9P48067 706 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 CLRN1P58418 232 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 IL2P60568 153 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 BLOC1S1P78537 153 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 SIM1P81133 766 aaPredicted RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 ZNF169Q14929 603 aaPredicted RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 DHCR24Q15392 516 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 ADRM1Q16186 407 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 PAPD7Q5XG87 772 aaKnown RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 ZKSCAN2Q63HK3 967 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 STRA8Q7Z7C7 330 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 THNSL2Q86YJ6 484 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 MAPKAPK5Q8IW41 473 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 AHI1Q8N157 1196 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 TMEM132CQ8N3T6 1108 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 LCORLQ8N3X6 602 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 Q8NA96 180 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 LMBR1Q8WVP7 490 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 PDLIM2Q96JY6 352 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 FAM193BQ96PV7 902 aaPredicted RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.46□□□□□ -2.02
CD44-212ENST00000524922 BCO1Q9HAY6 547 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 ADARB2Q9NS39 739 aaKnown RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 VSX1Q9NZR4 365 aaPredicted RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 DPP7Q9UHL4 492 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 FRMD4BQ9Y2L6 1034 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 KDM5AP29375 1690 aaKnown RBP2.46□□□□□ -2.02
CD44-212ENST00000524922 ABCA6Q8N139 1617 aa2.46□□□□□ -2.02
CD44-212ENST00000524922 CCDC18Q5T9S5 1454 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 POLR1AO95602 1720 aaPredicted RBP2.45□□□□□ -2.02
CD44-212ENST00000524922 ARHGAP31Q2M1Z3 1444 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 WIPF3A6NGB9 483 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ENPP3O14638 875 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 PDE8AO60658 829 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 CDC45O75419 566 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 CDKL5O76039 1030 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 FPR1P21462 350 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 GCSHP23434 173 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 LMO1P25800 156 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 PCSK1P29120 753 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 AVPR1BP47901 424 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 PROK1P58294 105 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 ATP8B2P98198 1209 aa2.45□□□□□ -2.02
CD44-212ENST00000524922 SP140Q13342 867 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms