RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 NIFKQ9BYG3 293 aaKnown RBP7.29□□□□□ -1.24
LIN7C-202ENST00000524596 TMEM168Q9H0V1 697 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 CDH19Q9H159 772 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 KBTBD4Q9NVX7 518 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 COQ3Q9NZJ6 369 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 ZIM2Q9NZV7 527 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 CCDC59Q9P031 241 aaKnown RBP7.29□□□□□ -1.24
LIN7C-202ENST00000524596 HESX1Q9UBX0 185 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 PCDHB2Q9Y5E7 798 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 SNX13Q9Y5W8 968 aa7.29□□□□□ -1.24
LIN7C-202ENST00000524596 FAM47DPA6NHR8 397 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CCNKO75909 580 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 RAC2P15153 192 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 PIP4K2AP48426 406 aaPredicted RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ATXN1P54253 815 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 PSMD4P55036 377 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 C21orf59P57076 290 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 GPR85P60893 370 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 DNM1Q05193 864 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TMEM62Q0P6H9 643 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ALG1LQ6GMV1 187 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 PMEPA1Q969W9 287 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CCT8L2Q96SF2 557 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CIB1Q99828 191 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 MXD3Q9BW11 206 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CCDC106Q9BWC9 280 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 BRD7Q9NPI1 651 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 UFSP2Q9NUQ7 469 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CDC23Q9UJX2 597 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 KLHL20Q9Y2M5 609 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 MYO3BQ8WXR4 1341 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TRAV6A0A075B6T7 132 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 I3L4J1 428 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 IFIT3O14879 490 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TP73O15350 636 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 KERAO60938 352 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 GABBR2O75899 941 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ATP5F1P24539 256 aaPredicted RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SCTRP47872 440 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 HPCAP84074 193 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 MXD4Q14582 209 aaPredicted RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SNX17Q15036 470 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TRIM71Q2Q1W2 868 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 EPC2Q52LR7 807 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ARMCX4Q5H9R4 360 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TTC22Q5TAA0 569 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TMC4Q7Z404 712 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SLC51BQ86UW2 128 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 GANCQ8TET4 914 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 FATE1Q969F0 183 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 EYA3Q99504 573 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 L2HGDHQ9H9P8 463 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 C12orf10Q9HB07 376 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 NTN4Q9HB63 628 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ARHGAP26Q9UNA1 814 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 KIF24Q5T7B8 1368 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TRAF5O00463 557 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 RNF113AO15541 343 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 STX10O60499 249 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 DNAJB5O75953 348 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CLPTM1O96005 669 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 PRLRP16471 622 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ALAS2P22557 587 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SP100P23497 879 aaPredicted RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 RPL9P32969 192 aaKnown RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 MASP1P48740 699 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 BNC1Q01954 994 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TAP1Q03518 808 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 POLA2Q14181 598 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SMCO1Q147U7 214 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 EMC2Q15006 297 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 CAMK4Q16566 473 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 LRIT3Q3SXY7 679 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SPATS1Q496A3 300 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ZNF704Q6ZNC4 412 aaPredicted RBP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 LRRTM3Q86VH5 581 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SLC15A3Q8IY34 581 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 USHBP1Q8N6Y0 703 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 NELL1Q92832 810 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 APBA2Q99767 749 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TUBB6Q9BUF5 446 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.28□□□□□ -1.24
LIN7C-202ENST00000524596 KIAA1586Q9HCI6 787 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 FGFR1OP2Q9NVK5 253 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 TXNDC16Q9P2K2 825 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 SH3TC1Q8TE82 1336 aa7.28□□□□□ -1.24
LIN7C-202ENST00000524596 ZBBXA8MT70 800 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 GMFGO60234 142 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 MFN2O95140 757 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 SCGB1D2O95969 90 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 ZBTB48P10074 688 aaPredicted RBP7.27□□□□□ -1.24
LIN7C-202ENST00000524596 NEK4P51957 841 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 ECT2LQ008S8 904 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 GSTM4Q03013 218 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 C2orf54Q08AI8 447 aa7.27□□□□□ -1.24
LIN7C-202ENST00000524596 ILF2Q12905 390 aaKnown RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms