RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 MCM2P49736 904 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 MAPK7Q13164 816 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
SPARC-206ENST00000524277 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 PARM1Q6UWI2 310 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 TAS1R3Q7RTX0 852 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 FGF14Q92915 247 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 AK8Q96MA6 479 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 NELL2Q99435 816 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 MMTAG2Q9BU76 263 aaKnown RBP12.95□□□□□ -0.34
SPARC-206ENST00000524277 RUSC1Q9BVN2 902 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 LARSQ9P2J5 1176 aaKnown RBP12.95□□□□□ -0.34
SPARC-206ENST00000524277 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
SPARC-206ENST00000524277 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
SPARC-206ENST00000524277 KANSL1LA0AUZ9 987 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 H3BQV1 296 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ABLIM1O14639 778 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 PRRG1O14668 218 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 SLC16A4O15374 487 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 CLDN3O15551 220 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 TBC1D4O60343 1298 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ECI2O75521 394 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 BMP15O95972 392 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 PAX3P23760 479 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
SPARC-206ENST00000524277 BRCC3P46736 316 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 OSTNP61366 133 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 GPC5P78333 572 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ROR1Q01973 937 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 MCL1Q07820 350 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
SPARC-206ENST00000524277 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPARC-206ENST00000524277 IL17AQ16552 155 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 SLC44A4Q53GD3 710 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ZNF280DQ6N043 979 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 C1orf210Q8IVY1 113 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ELMOD1Q8N336 334 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 CEP120Q8N960 986 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 C3orf58Q8NDZ4 430 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 TMEM161BQ8NDZ6 487 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 SUSD3Q96L08 255 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 ZMAT2Q96NC0 199 aaKnown RBP12.94□□□□□ -0.34
SPARC-206ENST00000524277 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
SPARC-206ENST00000524277 GOLGA2P5Q9HBQ8 144 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 DLGAP2Q9P1A6 1054 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 CFAP54Q96N23 3096 aa12.94□□□□□ -0.34
SPARC-206ENST00000524277 DMDP11532 3685 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 SFI1A8K8P3 1242 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 NCAM2O15394 837 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 XPOTO43592 962 aaKnown RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 RHOP08100 348 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 CLTAP09496 248 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 PLA2G4BP0C869 781 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 MAPTP10636 758 aaKnown RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 CYP3A5P20815 502 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 CDC25AP30304 524 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 SLC12A3P55017 1021 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 NTHL1P78549 312 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 SOX4Q06945 474 aaPredicted RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 ZRSR1Q15695 479 aaKnown RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 MLF2Q15773 248 aaPredicted RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 KCNK18Q7Z418 384 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 NPAS3Q8IXF0 933 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 PJA1Q8NG27 643 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 BCO2Q9BYV7 579 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 UPF2Q9HAU5 1272 aaKnown RBP12.93□□□□□ -0.34
SPARC-206ENST00000524277 ODF2LQ9ULJ1 636 aa12.93□□□□□ -0.34
SPARC-206ENST00000524277 VWA8A3KMH1 1905 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 WDR27A2RRH5 827 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 I3L4J1 428 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 LRPAP1P30533 357 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 MCM4P33991 863 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 SLC10A6Q3KNW5 377 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 ZNF528Q3MIS6 628 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 CTXN3Q4LDR2 81 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 CYP4A22Q5TCH4 519 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 CD302Q8IX05 232 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 ADSSL1Q8N142 457 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 ELSPBP1Q96BH3 223 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 CALML4Q96GE6 196 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 ZNF512Q96ME7 567 aaPredicted RBP12.92□□□□□ -0.34
SPARC-206ENST00000524277 PNMA5Q96PV4 448 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
SPARC-206ENST00000524277 CYP4F11Q9HBI6 524 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 HCFC1R1Q9NWW0 138 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 AFF4Q9UHB7 1163 aaKnown RBP12.92□□□□□ -0.34
SPARC-206ENST00000524277 FBXL5Q9UKA1 691 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 MRPS17Q9Y2R5 130 aaKnown RBP12.92□□□□□ -0.34
SPARC-206ENST00000524277 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.92□□□□□ -0.34
SPARC-206ENST00000524277 GVINP1Q7Z2Y8 2422 aa12.92□□□□□ -0.34
SPARC-206ENST00000524277 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms