RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 STRN3Q13033 797 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 ZBTB6Q15916 424 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 KYAT1Q16773 422 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 ARSHQ5FYA8 562 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 TPGS2Q68CL5 300 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 PARM1Q6UWI2 310 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 GPR152Q8TDT2 470 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 FGF14Q92915 247 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 SHDQ96IW2 340 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 ZBTB45Q96K62 511 aaPredicted RBP13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 SUSD3Q96L08 255 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 RPP25Q9BUL9 199 aaKnown RBP13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 DDX23Q9BUQ8 820 aaKnown RBP13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 SEMA4AQ9H3S1 761 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 LARSQ9P2J5 1176 aaKnown RBP13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 ODF2LQ9ULJ1 636 aa13.83□□□□□ -0.2
TOP1MT-217ENST00000523417 PTPRZ1P23471 2315 aaPredicted RBP13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 CCL16O15467 120 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 CLDN3O15551 220 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 CLTAP09496 248 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 PTPN2P17706 415 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 CYP3A5P20815 502 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 NCKAP1LP55160 1127 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 OSTNP61366 133 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 GPC5P78333 572 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 NTHL1P78549 312 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 ANGPT1Q15389 498 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 VARS2Q5ST30 1063 aaKnown RBP13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 ITFG1Q8TB96 612 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 BORCS6Q96GS4 357 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 OXCT2Q9BYC2 517 aaPredicted RBP13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 SIT1Q9Y3P8 196 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 DOCK8Q8NF50 2099 aa13.82□□□□□ -0.2
TOP1MT-217ENST00000523417 TTC26A0AVF1 554 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 VWA3AA6NCI4 1184 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 PRR23AA6NEV1 266 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 H3BQV1 296 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 M0QZQ0 153 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 ECI2O75521 394 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 OAZ2O95190 189 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 BMP15O95972 392 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 PIGRP01833 764 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 PAX3P23760 479 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 LRPAP1P30533 357 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 ZNF131P52739 623 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 ROR1Q01973 937 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 PRKCQQ04759 706 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 PABPC1LQ4VXU2 614 aaKnown RBP13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 ASCL5Q7RTU5 278 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 HAUS6Q7Z4H7 955 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 APPL2Q8NEU8 664 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 NKD2Q969F2 451 aaPredicted RBP13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 TBC1D17Q9HA65 648 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 ARHGEF3Q9NR81 526 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 RIF1Q5UIP0 2472 aaKnown RBP13.81□□□□□ -0.2
TOP1MT-217ENST00000523417 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 I3L4J1 428 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 RHOP08100 348 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 ELF1P32519 619 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 ABCD1P33897 745 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 LONP1P36776 959 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 AARSP49588 968 aaKnown RBP eCLIP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 PFKPQ01813 784 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 POU5F1Q01860 360 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 BRAPQ7Z569 592 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 NPAS3Q8IXF0 933 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 BEST2Q8NFU1 509 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 C18orf25Q96B23 403 aaPredicted RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 CDK5RAP3Q96JB5 506 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 HAPLN2Q9GZV7 340 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 AFF4Q9UHB7 1163 aaKnown RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 CA14Q9ULX7 337 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 NUB1Q9Y5A7 615 aa13.8□□□□□ -0.2
TOP1MT-217ENST00000523417 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 STK25O00506 426 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 ZNF197O14709 1029 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 FAM189A1O60320 539 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 UBA7P41226 1012 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 RAD51AP2Q09MP3 1159 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 PRSS36Q5K4E3 855 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 FRMD5Q7Z6J6 570 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 CD302Q8IX05 232 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 DDX12PQ92771 950 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 CALML4Q96GE6 196 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 NELL2Q99435 816 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 ST6GALNAC4Q9H4F1 302 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms