RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RTN2O75298 545 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 DSG3P32926 999 aa17.09■□□□□ 0.33
USP42-207ENST00000521713 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 SHMT1P34896 483 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 PNPLA4P41247 253 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 HERVK_113P62684 666 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 HEATR6Q6AI08 1181 aaKnown RBP17.08■□□□□ 0.33
USP42-207ENST00000521713 CDKL3Q8IVW4 592 aaPredicted RBP17.08■□□□□ 0.33
USP42-207ENST00000521713 DEPDC1BQ8WUY9 529 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 MED15Q96RN5 788 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 EPAS1Q99814 870 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.33
USP42-207ENST00000521713 DHX35Q9H5Z1 703 aaKnown RBP17.08■□□□□ 0.33
USP42-207ENST00000521713 TJP2Q9UDY2 1190 aa17.08■□□□□ 0.33
USP42-207ENST00000521713 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP42-207ENST00000521713 KRT37O76014 449 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 MOCS2O96007 188 aaPredicted RBP17.08■□□□□ 0.32
USP42-207ENST00000521713 OAZ1P54368 228 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 MAGOHP61326 146 aaKnown RBP17.08■□□□□ 0.32
USP42-207ENST00000521713 NME3Q13232 169 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 SKIV2LQ15477 1246 aaKnown RBP17.08■□□□□ 0.32
USP42-207ENST00000521713 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 SRRM1Q8IYB3 904 aaKnown RBP17.08■□□□□ 0.32
USP42-207ENST00000521713 OSBPL1AQ9BXW6 950 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 UNC45AQ9H3U1 944 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 ZFP69BQ9UJL9 534 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP42-207ENST00000521713 SLC1A1P43005 524 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 WDR75Q8IWA0 830 aaKnown RBP17.08■□□□□ 0.32
USP42-207ENST00000521713 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
USP42-207ENST00000521713 SPON2Q9BUD6 331 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 DCDC2CA8MYV0 355 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 HSD17B4P51659 736 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 CRLF3Q8IUI8 442 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 CFAP36Q96G28 342 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 RICTORQ6R327 1708 aa17.08■□□□□ 0.32
USP42-207ENST00000521713 NEMP1O14524 444 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 ART3Q13508 389 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 SNX17Q15036 470 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 PCNX4Q63HM2 1172 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 SPOPLQ6IQ16 392 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 ANO5Q75V66 913 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 SP110Q9HB58 689 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 RRAGCQ9HB90 399 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 LSM7Q9UK45 103 aaKnown RBP17.07■□□□□ 0.32
USP42-207ENST00000521713 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 HAUS5O94927 633 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 UPP2O95045 317 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 CYBBP04839 570 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 TGFB3P10600 412 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 PCYT1AP49585 367 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 NAA30Q147X3 362 aaPredicted RBP17.07■□□□□ 0.32
USP42-207ENST00000521713 TMCO4Q5TGY1 634 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
USP42-207ENST00000521713 NT5C1AQ9BXI3 368 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 USP27XA6NNY8 438 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 RANBP1P43487 201 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 PPATQ06203 517 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 TAF1BQ53T94 588 aaPredicted RBP17.07■□□□□ 0.32
USP42-207ENST00000521713 YAF2Q8IY57 180 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 SIK2Q9H0K1 926 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 GEMIN8Q9NWZ8 242 aaKnown RBP17.07■□□□□ 0.32
USP42-207ENST00000521713 SYNPO2Q9UMS6 1093 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 GPR182O15218 404 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 CORO7P57737 925 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 CDR2Q01850 454 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 FSCBQ5H9T9 825 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 PDCD2LQ9BRP1 358 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
USP42-207ENST00000521713 LCP1P13796 627 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
USP42-207ENST00000521713 CD302Q8IX05 232 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 ECT2Q9H8V3 914 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 FAM8A1Q9UBU6 413 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 SSU72P8A0A1W2PR75 194 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 ZC2HC1CQ53FD0 456 aaPredicted RBP17.06■□□□□ 0.32
USP42-207ENST00000521713 LRIG3Q6UXM1 1119 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 RBBP8NLQ8NC74 664 aaPredicted RBP17.06■□□□□ 0.32
USP42-207ENST00000521713 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 NDE1Q9NXR1 346 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 CPA4Q9UI42 421 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 UBQLN1Q9UMX0 589 aaKnown RBP17.06■□□□□ 0.32
USP42-207ENST00000521713 BFSP2Q13515 415 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 CNPY4Q8N129 248 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 SYTL5Q8TDW5 730 aaPredicted RBP17.06■□□□□ 0.32
USP42-207ENST00000521713 SH3TC2Q8TF17 1288 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 A0A1B0GTH6 734 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 PDHXO00330 501 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 HLA-DRAP01903 254 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 PGK2P07205 417 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 MCF2P10911 925 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 CHRNA3P32297 505 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms