RNA–Protein interactions for RNA: ENST00000521223.5

FAM49B-219, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-219ENST00000521223 USP34Q70CQ2 3546 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 I3L4J1 428 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 STK25O00506 426 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 IGFBP6P24592 240 aaPredicted RBP20.19■□□□□ 0.82
FAM49B-219ENST00000521223 ELF1P32519 619 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 BRCC3P46736 316 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 NCKAP1LP55160 1127 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 SLC10A6Q3KNW5 377 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 ARSHQ5FYA8 562 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 VARS2Q5ST30 1063 aaKnown RBP20.19■□□□□ 0.82
FAM49B-219ENST00000521223 RASSF8Q8NHQ8 419 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 NUMBLQ9Y6R0 609 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 MYH11P35749 1972 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 CITO14578 2027 aa20.19■□□□□ 0.82
FAM49B-219ENST00000521223 PROB1E7EW31 1015 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 PDCP20941 246 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 PABPC1LQ4VXU2 614 aaKnown RBP20.18■□□□□ 0.82
FAM49B-219ENST00000521223 RSPO2Q6UXX9 243 aaPredicted RBP20.18■□□□□ 0.82
FAM49B-219ENST00000521223 HAUS6Q7Z4H7 955 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 APPL2Q8NEU8 664 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 FGF13Q92913 245 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 C18orf25Q96B23 403 aaPredicted RBP20.18■□□□□ 0.82
FAM49B-219ENST00000521223 TSPAN18Q96SJ8 248 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 PARVGQ9HBI0 331 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 FAM86C1Q9NVL1 165 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 MAFFQ9ULX9 164 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 DOCK8Q8NF50 2099 aa20.18■□□□□ 0.82
FAM49B-219ENST00000521223 NPHP3-ACAD11A0A0J9YXS1 232 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 ABLIM3O94929 683 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 CLTAP09496 248 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 LIG4P49917 911 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 NTHL1P78549 312 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 ROR1Q01973 937 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 MRPL58Q14197 206 aaKnown RBP20.17■□□□□ 0.82
FAM49B-219ENST00000521223 PHLDB3Q6NSJ2 640 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 GPBP1Q86WP2 473 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 CCDC105Q8IYK2 499 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 MYCT1Q8N699 235 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 SUSD3Q96L08 255 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 REEP2Q9BRK0 252 aa20.17■□□□□ 0.82
FAM49B-219ENST00000521223 AVENQ9NQS1 362 aaPredicted RBP20.17■□□□□ 0.82
FAM49B-219ENST00000521223 ARHGEF37A1IGU5 675 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 KRBA1A5PL33 1030 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 PRRG1O14668 218 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 XPOTO43592 962 aaKnown RBP20.16■□□□□ 0.82
FAM49B-219ENST00000521223 TBC1D4O60343 1298 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 GFRA3O60609 400 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 FAM13AO94988 1023 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 LRG1P02750 347 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 KRT18P05783 430 aaKnown RBP20.16■□□□□ 0.82
FAM49B-219ENST00000521223 ATF2P15336 505 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 MARCKSP29966 332 aaPredicted RBP20.16■□□□□ 0.82
FAM49B-219ENST00000521223 MCM4P33991 863 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 ZNF131P52739 623 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 TPGS2Q68CL5 300 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 TCEAL8Q8IYN2 117 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 GPR152Q8TDT2 470 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 SHDQ96IW2 340 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 OXCT2Q9BYC2 517 aaPredicted RBP20.16■□□□□ 0.82
FAM49B-219ENST00000521223 DNMT3BQ9UBC3 853 aaKnown RBP20.16■□□□□ 0.82
FAM49B-219ENST00000521223 CA14Q9ULX7 337 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 TBX20Q9UMR3 447 aa20.16■□□□□ 0.82
FAM49B-219ENST00000521223 HNRNPDLO14979 420 aaKnown RBP20.15■□□□□ 0.82
FAM49B-219ENST00000521223 PI15O43692 258 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 CXCL8P10145 99 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 PTPN2P17706 415 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 CYP3A5P20815 502 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 LRPAP1P30533 357 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 NBL1P41271 181 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
FAM49B-219ENST00000521223 PPP2R3AQ06190 1150 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 CUL4AQ13619 759 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 DHX8Q14562 1220 aaKnown RBP20.15■□□□□ 0.82
FAM49B-219ENST00000521223 SF3A1Q15459 793 aaKnown RBP20.15■□□□□ 0.82
FAM49B-219ENST00000521223 CTXN3Q4LDR2 81 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 SEZ6Q53EL9 994 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 ZNF280DQ6N043 979 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 PARM1Q6UWI2 310 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 DTWD2Q8NBA8 298 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 ITFG1Q8TB96 612 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 RAD54LQ92698 747 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 FGF14Q92915 247 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 TBC1D17Q9HA65 648 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 ARHGEF3Q9NR81 526 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 BLOC1S4Q9NUP1 217 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 HCFC1R1Q9NWW0 138 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 GDE1Q9NZC3 331 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 UBQLN1Q9UMX0 589 aaKnown RBP20.15■□□□□ 0.82
FAM49B-219ENST00000521223 PCDHB8Q9UN66 801 aa20.15■□□□□ 0.82
FAM49B-219ENST00000521223 MRPS23Q9Y3D9 190 aaKnown RBP20.15■□□□□ 0.82
FAM49B-219ENST00000521223 CACNA1HO95180 2353 aa20.14■□□□□ 0.82
FAM49B-219ENST00000521223 TTC26A0AVF1 554 aa20.14■□□□□ 0.81
FAM49B-219ENST00000521223 WDR27A2RRH5 827 aa20.14■□□□□ 0.81
FAM49B-219ENST00000521223 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
FAM49B-219ENST00000521223 K7ENM7 598 aa20.14■□□□□ 0.81
FAM49B-219ENST00000521223 MEFVO15553 781 aaPredicted RBP20.14■□□□□ 0.81
FAM49B-219ENST00000521223 TRAK2O60296 914 aa20.14■□□□□ 0.81
FAM49B-219ENST00000521223 TBCAO75347 108 aaKnown RBP20.14■□□□□ 0.81
FAM49B-219ENST00000521223 PIGRP01833 764 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms