RNA–Protein interactions for RNA: ENST00000520427.1

SRA1-202, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-202ENST00000520427 KANSL3Q9P2N6 904 aa16.71■□□□□ 0.27
SRA1-202ENST00000520427 SIX4Q9UIU6 781 aa16.71■□□□□ 0.27
SRA1-202ENST00000520427 PCDHGC5Q9Y5F6 944 aa16.71■□□□□ 0.27
SRA1-202ENST00000520427 GRM6O15303 877 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 DLATP10515 647 aaKnown RBP16.7■□□□□ 0.26
SRA1-202ENST00000520427 MCCD1P59942 119 aaPredicted RBP16.7■□□□□ 0.26
SRA1-202ENST00000520427 TFAMQ00059 246 aaKnown RBP16.7■□□□□ 0.26
SRA1-202ENST00000520427 FKBP3Q00688 224 aaKnown RBP16.7■□□□□ 0.26
SRA1-202ENST00000520427 UPP1Q16831 310 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 FBXO22Q8NEZ5 403 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 RSPH1Q8WYR4 309 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 ELMO3Q96BJ8 720 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 IGSF21Q96ID5 467 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 TMEM175Q9BSA9 504 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 PRDM12Q9H4Q4 367 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 ALG13Q9NP73 1137 aaKnown RBP16.7■□□□□ 0.26
SRA1-202ENST00000520427 INTS13Q9NVM9 706 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 ANO10Q9NW15 660 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 UBQLN1Q9UMX0 589 aaKnown RBP16.7■□□□□ 0.26
SRA1-202ENST00000520427 DERAQ9Y315 318 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 BRWD1Q9NSI6 2320 aa16.7■□□□□ 0.26
SRA1-202ENST00000520427 SPTBN5Q9NRC6 3674 aaKnown RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 ANO9A1A5B4 782 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 I3L4J1 428 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 TULP1O00294 542 aaPredicted RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 PODXLO00592 558 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 CETN3O15182 167 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 MAPK13O15264 365 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 SPTLC1O15269 473 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 FGF18O76093 207 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 CSPG5O95196 566 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 RPL13P26373 211 aaKnown RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 LRPAP1P30533 357 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 PSMC2P35998 433 aaKnown RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 CLDN10P78369 228 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 PPP3CAQ08209 521 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 BFSP1Q12934 665 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 NCAPHQ15003 741 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 TAS1R1Q7RTX1 841 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 CD302Q8IX05 232 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 SPPL3Q8TCT6 385 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 CEP63Q96MT8 703 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 FAM193BQ96PV7 902 aaPredicted RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 MKNK1Q9BUB5 465 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 SRRTQ9BXP5 876 aaKnown RBP16.69■□□□□ 0.26
SRA1-202ENST00000520427 HSD3B7Q9H2F3 369 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
SRA1-202ENST00000520427 COL6A3P12111 3177 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 TMEM265A0A087WTH1 108 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 BICDL2A1A5D9 508 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 LRRN2O75325 713 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 VNN1O95497 513 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 BRCC3P46736 316 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 TDRD10Q5VZ19 366 aaKnown RBP16.68■□□□□ 0.26
SRA1-202ENST00000520427 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 WDR49Q8IV35 697 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 TMC2Q8TDI7 906 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 B3GALT6Q96L58 329 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 GPR62Q9BZJ7 368 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 SAMSN1Q9NSI8 373 aaKnown RBP16.68■□□□□ 0.26
SRA1-202ENST00000520427 SLC38A7Q9NVC3 462 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 DPP3Q9NY33 737 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 FAN1Q9Y2M0 1017 aa16.68■□□□□ 0.26
SRA1-202ENST00000520427 H3BNC9 293 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 PIRO00625 290 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 ITGB3P05106 788 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 EPB41P11171 864 aaKnown RBP16.67■□□□□ 0.26
SRA1-202ENST00000520427 CYP3A5P20815 502 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
SRA1-202ENST00000520427 IRS1P35568 1242 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 VAMP7P51809 220 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 GPM6BQ13491 265 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 C15orf39Q6ZRI6 1047 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 FILIP1Q7Z7B0 1213 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
SRA1-202ENST00000520427 GUCD1Q96NT3 240 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 SAMD11Q96NU1 681 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 PCDHB12Q9Y5F1 795 aa16.67■□□□□ 0.26
SRA1-202ENST00000520427 CST3P01034 146 aaPredicted RBP16.66■□□□□ 0.26
SRA1-202ENST00000520427 C4BPAP04003 597 aaKnown RBP16.66■□□□□ 0.26
SRA1-202ENST00000520427 ALDH2P05091 517 aa16.66■□□□□ 0.26
SRA1-202ENST00000520427 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
SRA1-202ENST00000520427 TNNI1P19237 187 aa16.66■□□□□ 0.26
SRA1-202ENST00000520427 ALDH7A1P49419 539 aaKnown RBP16.66■□□□□ 0.26
SRA1-202ENST00000520427 ERVFC1P60507 584 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms