RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CTXN3Q4LDR2 81 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 ARSHQ5FYA8 562 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 VARS2Q5ST30 1063 aaKnown RBP17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 ASTLQ6HA08 431 aaPredicted RBP17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 TMEM105Q8N8V8 129 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 KRI1Q8N9T8 703 aaKnown RBP17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 ING5Q8WYH8 240 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 NTPCRQ9BSD7 190 aaKnown RBP17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 MSTO1Q9BUK6 570 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 RHOBTB2Q9BYZ6 727 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 EPS15L1Q9UBC2 864 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 NUMBLQ9Y6R0 609 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 ABLIM1O14639 778 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 XPOTO43592 962 aaKnown RBP17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 CLTAP09496 248 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 LAMP2P13473 410 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 TNFSF9P41273 254 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 ROR1Q01973 937 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 MCL1Q07820 350 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 TCF15Q12870 199 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 SLC10A6Q3KNW5 377 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 PABPC1LQ4VXU2 614 aaKnown RBP17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 ZNF280DQ6N043 979 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 FAM173BQ6P4H8 233 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 ALKAL1Q6UXT8 129 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 RSPO2Q6UXX9 243 aaPredicted RBP17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 DYMQ7RTS9 669 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 PHOX2BQ99453 314 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 RPF1Q9H9Y2 349 aaKnown RBP17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 CYP4F11Q9HBI6 524 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 BLOC1S4Q9NUP1 217 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 HCFC1R1Q9NWW0 138 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 TBX20Q9UMR3 447 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 BACE2Q9Y5Z0 518 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 MYH11P35749 1972 aa17.59■□□□□ 0.41
IGHV3-42-201ENST00000520410 SYN3O14994 580 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 NMT1P30419 496 aaKnown RBP17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 CUL4AQ13619 759 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 XKR4Q5GH76 650 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 DSTYKQ6XUX3 929 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 SLC44A3Q8N4M1 653 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 APPL2Q8NEU8 664 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 EPSTI1Q96J88 318 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 IRF2BPLQ9H1B7 796 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 CDH7Q9ULB5 785 aa17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 MRPS23Q9Y3D9 190 aaKnown RBP17.58■□□□□ 0.4
IGHV3-42-201ENST00000520410 GALR2O43603 387 aaPredicted RBP17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 SRFP11831 508 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 SYT1P21579 422 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 HOXA9P31269 272 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 KYAT1Q16773 422 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 RRAGBQ5VZM2 374 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 CD300LGQ6UXG3 332 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 USP37Q86T82 979 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 ELMOD1Q8N336 334 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 ITFG1Q8TB96 612 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 LRRC15Q8TF66 581 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 NOC3LQ8WTT2 800 aaKnown RBP17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 NXPE3Q969Y0 559 aa17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 UBQLN1Q9UMX0 589 aaKnown RBP17.57■□□□□ 0.4
IGHV3-42-201ENST00000520410 WDR27A2RRH5 827 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 LACTBL1A8MY62 500 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 OGTO15294 1046 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 HSP90AA1P07900 732 aaKnown RBP17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 GUCY2FP51841 1108 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 RESTQ13127 1097 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 HTR4Q13639 388 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZBTB41Q5SVQ8 909 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 CWF19L1Q69YN2 538 aaKnown RBP17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 MTSS1LQ765P7 747 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 DDX12PQ92771 950 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 FGF13Q92913 245 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 CLIC6Q96NY7 704 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 KXD1Q9BQD3 176 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 CORO1BQ9BR76 489 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 HAPLN2Q9GZV7 340 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 PLEKHA5Q9HAU0 1116 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 DNMT3BQ9UBC3 853 aaKnown RBP17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 FBXL5Q9UKA1 691 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZFP37Q9Y6Q3 630 aaPredicted RBP17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 VWA8A3KMH1 1905 aa17.56■□□□□ 0.4
IGHV3-42-201ENST00000520410 MTCL1Q9Y4B5 1905 aaKnown RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 MEFVO15553 781 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 IDEP14735 1019 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 ABCD1P33897 745 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 DDIT3P35638 169 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 STAT6P42226 847 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 CLCN5P51795 746 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 YWHAHQ04917 246 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZC2HC1CQ53FD0 456 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 ADALQ6DHV7 355 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 PARM1Q6UWI2 310 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 USP49Q70CQ1 688 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms