RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ADH1AP07327 375 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 CFHP08603 1231 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 FGFR3P22607 806 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 TNFSF9P41273 254 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 CDR1P51861 262 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 SLC12A3P55017 1021 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 WNT7BP56706 349 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 SPAG1Q07617 926 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 GIT2Q14161 759 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 PSMD5Q16401 504 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 ATAT1Q5SQI0 421 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 HYIQ5T013 277 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 PARM1Q6UWI2 310 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 GRASPQ7Z6J2 395 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-213ENST00000519848 ZBTB33Q86T24 672 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 ACO2Q99798 780 aaKnown RBP9.51□□□□□ -0.89
PABPC1-213ENST00000519848 EMILIN2Q9BXX0 1053 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-213ENST00000519848 BLOC1S4Q9NUP1 217 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 DLGAP2Q9P1A6 1054 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 EPS15L1Q9UBC2 864 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 LRWD1Q9UFC0 647 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 NR2E1Q9Y466 385 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 CACNA1HO95180 2353 aa9.51□□□□□ -0.89
PABPC1-213ENST00000519848 SMIM28A0A1B0GU29 152 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 TMEM189-UBE2V1I3L0A0 370 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 TBC1D4O60343 1298 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SEC24AO95486 1093 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 GJB2P29033 226 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 HOXC13P31276 330 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 GRM5P41594 1212 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 CCR2P41597 374 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 TRAPPC10P48553 1259 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 HMGN5P82970 282 aaKnown RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 ORC2Q13416 577 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.891e-17■■□□□ 12.1
PABPC1-213ENST00000519848 MAPK6Q16659 721 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 UPP1Q16831 310 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SLC10A6Q3KNW5 377 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 USP41Q3LFD5 358 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 ZNF568Q3ZCX4 644 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 FAM173BQ6P4H8 233 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 CEP57Q86XR8 500 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 ZBTB8OSQ8IWT0 167 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SUGP1Q8IWZ8 645 aaKnown RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 EXOC8Q8IYI6 725 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SIX5Q8N196 739 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 TTC9BQ8N6N2 239 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 TMEM161BQ8NDZ6 487 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SLC7A14Q8TBB6 771 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 GPR152Q8TDT2 470 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 ING5Q8WYH8 240 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 PRR14Q9BWN1 585 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 FGFBP2Q9BYJ0 223 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 PLA2G2FQ9BZM2 168 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 UBN1Q9NPG3 1134 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 FNIP2Q9P278 1114 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 DNMT3BQ9UBC3 853 aaKnown RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 MTRRQ9UBK8 725 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 NUMBLQ9Y6R0 609 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 KIF26AQ9ULI4 1882 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 PIEZO1Q92508 2521 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 TICRRQ7Z2Z1 1910 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SF3B1O75533 1304 aaKnown RBP eCLIP9.5□□□□□ -0.89
PABPC1-213ENST00000519848 DMDP11532 3685 aa9.5□□□□□ -0.89
PABPC1-213ENST00000519848 SCN1AP35498 2009 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 OBSL1O75147 1896 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 MIA3Q5JRA6 1907 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 WDR27A2RRH5 827 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 MOSPD3O75425 235 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 THP07101 528 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 C8AP07357 584 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 MAPTP10636 758 aaKnown RBP9.49□□□□□ -0.89
PABPC1-213ENST00000519848 LAMP2P13473 410 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 FCARP24071 287 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 GBP2P32456 591 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-213ENST00000519848 PRPHP41219 470 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 TDGQ13569 410 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 SAFBQ15424 915 aaKnown RBP eCLIP9.49□□□□□ -0.89
PABPC1-213ENST00000519848 HAUS3Q68CZ6 603 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 NPAS3Q8IXF0 933 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 UBALD2Q8IYN6 164 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 ZSWIM2Q8NEG5 633 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 FLCNQ8NFG4 579 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 TCEAL4Q96EI5 215 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 ZSCAN31Q96LW9 406 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-213ENST00000519848 TBC1D32Q96NH3 1257 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 TTPALQ9BTX7 342 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 COLEC11Q9BWP8 271 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 RHOBTB2Q9BYZ6 727 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 FOXQ1Q9C009 403 aa9.49□□□□□ -0.89
PABPC1-213ENST00000519848 C2orf40Q9H1Z8 148 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms