RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 TMEM161BQ8NDZ6 487 aa13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 SNX27Q96L92 541 aa13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 GRPEL1Q9HAV7 217 aa13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 GOLGA2P5Q9HBQ8 144 aa13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 WNT16Q9UBV4 365 aa13.61□□□□□ -0.23
TRAPPC9-206ENST00000519482 ADAM12O43184 909 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 MAPTP10636 758 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 AOC1P19801 751 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 SCP2P22307 547 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 FSHRP23945 695 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 SOX4Q06945 474 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 RESTQ13127 1097 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 AXDND1Q5T1B0 1012 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 SLC44A3Q8N4M1 653 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 C3orf58Q8NDZ4 430 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 ATOH1Q92858 354 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 KCNN1Q92952 543 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 CALML4Q96GE6 196 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 ZMAT2Q96NC0 199 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 PHOX2BQ99453 314 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 NOTCH4Q99466 2003 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 FBXL21Q9UKT6 434 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 ODF2LQ9ULJ1 636 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
TRAPPC9-206ENST00000519482 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 ANHXE9PGG2 379 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 PODXLO00592 558 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 CLDN3O15551 220 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 NARSO43776 548 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 SRFP11831 508 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 UBA7P41226 1012 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 BRCC3P46736 316 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 NCKAP1LP55160 1127 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 NOLC1Q14978 699 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 CCDC183Q5T5S1 534 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 CWF19L1Q69YN2 538 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 RSPO2Q6UXX9 243 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 GRASPQ7Z6J2 395 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 ZBTB45Q96K62 511 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 PLIN2Q99541 437 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 RTP3Q9BQQ7 232 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 RCOR1Q9UKL0 485 aa13.59□□□□□ -0.23
TRAPPC9-206ENST00000519482 H0Y858 1186 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 SYN3O14994 580 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 CCL16O15467 120 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 HARSP12081 509 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 NPR3P17342 541 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 LONP1P36776 959 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 MCL1Q07820 350 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 HTR4Q13639 388 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 FOXD4L6Q3SYB3 417 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 ARSHQ5FYA8 562 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 SLC8B1Q6J4K2 584 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 FOXD4L3Q6VB84 417 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 SIX5Q8N196 739 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 ZNF461Q8TAF7 563 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 ANP32BQ92688 251 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 SPATA32Q96LK8 384 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 PLEKHA5Q9HAU0 1116 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 ANKFY1Q9P2R3 1169 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 CDH7Q9ULB5 785 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 NUB1Q9Y5A7 615 aa13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-206ENST00000519482 USP34Q70CQ2 3546 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 ZFHX2Q9C0A1 2572 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 H7C4K7 107 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 I3L4J1 428 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 MEFVO15553 781 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 GADD45BO75293 160 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 ABLIM3O94929 683 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 CFHP08603 1231 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 ABCD1P33897 745 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 KYAT1Q16773 422 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 HAUS6Q7Z4H7 955 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 GDPD2Q9HCC8 539 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 SLC2A4RGQ9NR83 387 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 TMEM63CQ9P1W3 806 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 POLIQ9UNA4 740 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
TRAPPC9-206ENST00000519482 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 PROB1E7EW31 1015 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 PI15O43692 258 aa13.56□□□□□ -0.24
TRAPPC9-206ENST00000519482 TBC1D4O60343 1298 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms