RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 LINC01553A4QN01 128 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 CCDC169A6NNP5 214 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 TBKBP1A7MCY6 615 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 RFXAPO00287 272 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 SPTLC2O15270 562 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PRMT3O60678 531 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 KRT18P05783 430 aaKnown RBP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PLA2G4BP0C869 781 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 ERVK-21P61565 698 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 CAPSQ13938 189 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 KARSQ15046 597 aaKnown RBP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PCBP1Q15365 356 aaKnown RBP eCLIP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PAN2Q504Q3 1202 aaKnown RBP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 SPECC1Q5M775 1068 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 HYIQ5T013 277 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 RINT1Q6NUQ1 792 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 CAPN12Q6ZSI9 719 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 KCNK18Q7Z418 384 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 FAM35AQ86V20 835 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 ECHDC2Q86YB7 292 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 ABI1Q8IZP0 508 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 SYT2Q8N9I0 419 aaPredicted RBP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 LINC00301Q8NCQ3 95 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 DEPTORQ8TB45 409 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 STK32AQ8WU08 396 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PPM1EQ8WY54 764 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 KIFAP3Q92845 792 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 EPSTI1Q96J88 318 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 SAMD11Q96NU1 681 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 CLIC6Q96NY7 704 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 PANK2Q9BZ23 570 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 C2orf40Q9H1Z8 148 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 ELAC1Q9H777 363 aaKnown RBP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 MINDY3Q9H8M7 445 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 TMEM161AQ9NX61 479 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 FBXO2Q9UK22 296 aaPredicted RBP6.73□□□□□ -1.33
MRPS28-203ENST00000518371 CFAP45Q9UL16 551 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 STXBP5LQ9Y2K9 1186 aa6.73□□□□□ -1.33
MRPS28-203ENST00000518371 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 K7ERI5 159 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 HIP1RO75146 1068 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RGS9O75916 674 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 YEATS4O95619 227 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 EOMESO95936 686 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 FGFR1P11362 822 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 AXLP30530 894 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 CTNNB1P35222 781 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 DDIT3P35638 169 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 BMPR1AP36894 532 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 NAMPTP43490 491 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 NASPP49321 788 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 GATMP50440 423 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RAB27AP51159 221 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 EFNA5P52803 228 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 PEX3P56589 373 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 NRG1Q02297 640 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RAD51AP2Q09MP3 1159 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 PKP1Q13835 747 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 MAPK6Q16659 721 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 LONRF3Q496Y0 759 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TMEM119Q4V9L6 283 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RRAGBQ5VZM2 374 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 ATL3Q6DD88 541 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 HFE2Q6ZVN8 426 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 C1orf186Q6ZWK4 172 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 SPRED2Q7Z698 418 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TREML1Q86YW5 311 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TMEM192Q8IY95 271 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 CMTR2Q8IYT2 770 aaKnown RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 BSNDQ8WZ55 320 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RAD54LQ92698 747 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 ZNF689Q96CS4 500 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 PGBD4Q96DM1 585 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 DRC1Q96MC2 740 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 C17orf80Q9BSJ5 609 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RUSC1Q9BVN2 902 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TIPINQ9BVW5 301 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TRIM6Q9C030 488 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 CCSER1Q9C0I3 900 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TMEM117Q9H0C3 514 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 ZHX3Q9H4I2 956 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 AGPAT5Q9NUQ2 364 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 PCMTD2Q9NV79 361 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 PRMT7Q9NVM4 692 aaPredicted RBP6.72□□□□□ -1.33
MRPS28-203ENST00000518371 RWDD3Q9Y3V2 267 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 PCDHB2Q9Y5E7 798 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 EVPLQ92817 2033 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 ADGRA3Q8IWK6 1321 aa6.72□□□□□ -1.33
MRPS28-203ENST00000518371 TANC1Q9C0D5 1861 aa6.71□□□□□ -1.34
MRPS28-203ENST00000518371 NPHP3-ACAD11A0A0J9YXS1 232 aa6.71□□□□□ -1.34
MRPS28-203ENST00000518371 EPOPA6NHQ4 379 aa6.71□□□□□ -1.34
MRPS28-203ENST00000518371 B4GALT5O43286 388 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms