RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 RALGAPA1Q6GYQ0 2036 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 WDR27A2RRH5 827 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 MAN2B1O00754 1011 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 GDF9O60383 454 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ABLIM3O94929 683 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 LRG1P02750 347 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 PRKCBP05771 671 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 SPATA31C1P0DKV0 1188 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 SATB1Q01826 763 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 DMWDQ09019 674 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 GAS6Q14393 721 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 CALCRLQ16602 461 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 VITQ6UXI7 678 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 PRR23BQ6ZRT6 265 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ANKS3Q6ZW76 656 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ZBTB8OSQ8IWT0 167 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 FAM3CQ92520 227 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ASB16Q96NS5 453 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 TRMT61BQ9BVS5 477 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 LMAN1LQ9HAT1 526 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ZFP14Q9HCL3 533 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ZNF334Q9HCZ1 680 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 SEMA4GQ9NTN9 838 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 PIAS3Q9Y6X2 628 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 STK36Q9NRP7 1315 aa12.51□□□□□ -0.41
CTNNA1-205ENST00000517904 ACKR2O00590 384 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 PRRG1O14668 218 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 HRO43593 1189 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 LRP3O75074 770 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 SEC24AO95486 1093 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 CHRNB1P11230 501 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 XRCC6P12956 609 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 ATF2P15336 505 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 XBP1P17861 261 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 LIG1P18858 919 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 ATP2B1P20020 1258 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 GDI1P31150 447 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 VIPR2P41587 438 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 TXKP42681 527 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 CCR3P51677 355 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 SOX4Q06945 474 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 SRSF5Q13243 272 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 MAPK6Q16659 721 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 PRR23CQ6ZRP0 262 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 MCPH1Q8NEM0 835 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 IRF7Q92985 503 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 IER2Q9BTL4 223 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 KIFC3Q9BVG8 833 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 C2orf40Q9H1Z8 148 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 INSL5Q9Y5Q6 135 aa12.5□□□□□ -0.41
CTNNA1-205ENST00000517904 BAHCC1Q9P281 2608 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 SDK1Q7Z5N4 2213 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 ARNTLO00327 626 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 MOSPD3O75425 235 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 CDKL5O76039 1030 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 MICAL2O94851 1124 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 PSMC3P17980 439 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 HOXC13P31276 330 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 CXCL12P48061 93 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 ARPP19P56211 112 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 SIM2Q14190 667 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 CSRP2Q16527 193 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 WDR44Q5JSH3 913 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 PDZD4Q76G19 769 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 TCEAL8Q8IYN2 117 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 SMARCD2Q92925 531 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 UROC1Q96N76 676 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 CYP4F11Q9HBI6 524 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 TRPV5Q9NQA5 729 aa12.49□□□□□ -0.41
CTNNA1-205ENST00000517904 PDCD11Q14690 1871 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 SMIM28A0A1B0GU29 152 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 CHURC1-FNTBB4DL54 471 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 K7ESF4 209 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 ZNF197O14709 1029 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 NEMFO60524 1076 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 MED24O75448 989 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 REC8O95072 547 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 FDPSP14324 419 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 GJA1P17302 382 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 CCNE1P24864 410 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 ELF1P32519 619 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 KRT2P35908 639 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 NAMPTP43490 491 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 FNTBP49356 437 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 DCAF4L1Q3SXM0 396 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 CEP120Q8N960 986 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 CHAMP1Q96JM3 812 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
CTNNA1-205ENST00000517904 TMEM60Q9H2L4 133 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms