RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ACCSQ96QU6 501 aa26.82■■□□□ 1.88
PVT1-204ENST00000517525 PYM1Q9BRP8 204 aaKnown RBP26.82■■□□□ 1.88
PVT1-204ENST00000517525 TRIM9Q9C026 710 aa26.82■■□□□ 1.88
PVT1-204ENST00000517525 POMKQ9H5K3 350 aa26.82■■□□□ 1.88
PVT1-204ENST00000517525 RPF1Q9H9Y2 349 aaKnown RBP26.82■■□□□ 1.88
PVT1-204ENST00000517525 MTRRQ9UBK8 725 aa26.82■■□□□ 1.88
PVT1-204ENST00000517525 UBQLN1Q9UMX0 589 aaKnown RBP26.82■■□□□ 1.88
PVT1-204ENST00000517525 USTQ9Y2C2 406 aa26.82■■□□□ 1.88
PVT1-204ENST00000517525 NR2E1Q9Y466 385 aa26.82■■□□□ 1.88
PVT1-204ENST00000517525 LACTBL1A8MY62 500 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 SYN3O14994 580 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 IDEP14735 1019 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 FOXD4L6Q3SYB3 417 aaPredicted RBP26.81■■□□□ 1.88
PVT1-204ENST00000517525 ZBTB41Q5SVQ8 909 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 FOXD4L3Q6VB84 417 aaPredicted RBP26.81■■□□□ 1.88
PVT1-204ENST00000517525 CEP57Q86XR8 500 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 RPGRIP1Q96KN7 1286 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 C7orf25Q9BPX7 421 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 ZDHHC7Q9NXF8 308 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 FAM13BQ9NYF5 915 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 DERAQ9Y315 318 aa26.81■■□□□ 1.88
PVT1-204ENST00000517525 XPOTO43592 962 aaKnown RBP26.8■■□□□ 1.88
PVT1-204ENST00000517525 ADSSP30520 456 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 RAB33AQ14088 237 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 TMC5Q6UXY8 1006 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 ANKS3Q6ZW76 656 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 RTL10Q7L3V2 364 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 DHX58Q96C10 678 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 ASB7Q9H672 318 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 CDH22Q9UJ99 828 aa26.8■■□□□ 1.88
PVT1-204ENST00000517525 AGO2Q9UKV8 859 aaKnown RBP26.8■■□□□ 1.88
PVT1-204ENST00000517525 RPL17P18621 184 aaKnown RBP26.79■■□□□ 1.88
PVT1-204ENST00000517525 PAX3P23760 479 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 BRCC3P46736 316 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 ADALQ6DHV7 355 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 KANK3Q6NY19 840 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 PALB2Q86YC2 1186 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 SUSD3Q96L08 255 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 FBXW11Q9UKB1 542 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 ATP6V1DQ9Y5K8 247 aa26.79■■□□□ 1.88
PVT1-204ENST00000517525 POLR2DO15514 142 aaKnown RBP26.78■■□□□ 1.88
PVT1-204ENST00000517525 GCNT3O95395 438 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 CASP5P51878 434 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 KCNA1Q09470 495 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 MRPL58Q14197 206 aaKnown RBP26.78■■□□□ 1.88
PVT1-204ENST00000517525 SPATA1Q5VX52 437 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 KREMEN2Q8NCW0 462 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 KIF12Q96FN5 646 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 TMEM206Q9H813 350 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 C11orf16Q9NQ32 467 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 TUBGCP4Q9UGJ1 667 aa26.78■■□□□ 1.88
PVT1-204ENST00000517525 TISP43B9A030 160 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 TBC1D4O60343 1298 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 GARTP22102 1010 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 TKTP29401 623 aaKnown RBP26.77■■□□□ 1.88
PVT1-204ENST00000517525 AARSP49588 968 aaKnown RBP eCLIP26.77■■□□□ 1.88
PVT1-204ENST00000517525 KRT85P78386 507 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 BECN1Q14457 450 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 ZDHHC14Q8IZN3 488 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 LEO1Q8WVC0 666 aaPredicted RBP26.77■■□□□ 1.88
PVT1-204ENST00000517525 STAMQ92783 540 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 TBC1D7Q9P0N9 293 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 C2CD2Q9Y426 696 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 NUB1Q9Y5A7 615 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 VWA8A3KMH1 1905 aa26.77■■□□□ 1.88
PVT1-204ENST00000517525 CCDC195A0A1B0GUA6 201 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 ZMYND10O75800 440 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 POU2F2P09086 479 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 WEE2P0C1S8 567 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 MYBP10242 640 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 CMA1P23946 247 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 HOXA9P31269 272 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 EHHADHQ08426 723 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 TMEM31Q5JXX7 168 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 SLC8B1Q6J4K2 584 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 CRELD2Q6UXH1 353 aaPredicted RBP26.76■■□□□ 1.87
PVT1-204ENST00000517525 STXBP4Q6ZWJ1 553 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 POMGNT1Q8WZA1 660 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 ZNF707Q96C28 371 aaPredicted RBP26.76■■□□□ 1.87
PVT1-204ENST00000517525 MUTYHQ9UIF7 546 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 KCNH3Q9ULD8 1083 aa26.76■■□□□ 1.87
PVT1-204ENST00000517525 PDCD11Q14690 1871 aaKnown RBP26.76■■□□□ 1.87
PVT1-204ENST00000517525 SPDYE4A6NLX3 237 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 I3L4J1 428 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 M0QZQ0 153 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 ADAM12O43184 909 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 HNRNPA1P09651 372 aaKnown RBP eCLIP26.75■■□□□ 1.87
PVT1-204ENST00000517525 ACOT2P49753 483 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 UVSSAQ2YD98 709 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 VARS2Q5ST30 1063 aaKnown RBP26.75■■□□□ 1.87
PVT1-204ENST00000517525 NT5DC4Q86YG4 428 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 PLCD3Q8N3E9 789 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 FEZF2Q8TBJ5 459 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 FGFBP2Q9BYJ0 223 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 PRKD2Q9BZL6 878 aa26.75■■□□□ 1.87
PVT1-204ENST00000517525 WDR6Q9NNW5 1121 aaKnown RBP26.75■■□□□ 1.87
PVT1-204ENST00000517525 C5orf42Q9H799 3197 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 FAM237AA0A1B0GTK4 181 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 PVALEFA0A1B0GWK0 134 aa26.74■■□□□ 1.87
PVT1-204ENST00000517525 H7C4K7 107 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms