RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 NELL1Q92832 810 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 PAWRQ96IZ0 340 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 REXO4Q9GZR2 422 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 GSTO2Q9H4Y5 243 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 GREM2Q9H772 168 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 LANCL2Q9NS86 450 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 RBM12Q9NTZ6 932 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 KCTD5Q9NXV2 234 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 MOCS1Q9NZB8 636 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 LRIT1Q9P2V4 623 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 KCNE5Q9UJ90 142 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 MAPRE3Q9UPY8 281 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 MTO1Q9Y2Z2 717 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 TCRBV7S2A1N4TA0A589 114 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 CDHR4A6H8M9 788 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 ULK1O75385 1050 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 ELFN1P0C7U0 828 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 CKBP12277 381 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 OSMP13725 252 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 IL2RBP14784 551 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 GSPT1P15170 499 aaKnown RBP3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 MCAMP43121 646 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 KRTAP10-9P60411 292 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLFN5Q08AF3 891 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 SF3B3Q15393 1217 aaKnown RBP3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 MUM1L1Q5H9M0 696 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 EPHA10Q5JZY3 1008 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 TSHZ1Q6ZSZ6 1077 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 SEM1Q6ZVN7 128 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 FAM43AQ8N2R8 423 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 FATE1Q969F0 183 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLC2A13Q96QE2 648 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 ORAI2Q96SN7 254 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 TTC1Q99614 292 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 ACE2Q9BYF1 805 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 FAM30AQ9NZY2 134 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 ARPP21Q9UBL0 812 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 PCDHGA2Q9Y5H1 932 aa3.3□□□□□ -1.88
SNORA40.14-201ENST00000516543 WIPF3A6NGB9 483 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 KRTAP29-1A8MX34 341 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 ZEB2O60315 1214 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 ERN1O75460 977 aaKnown RBP3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 FCER1AP12319 257 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLC6A4P31645 630 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 GPR3P46089 330 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 GYS2P54840 703 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 MTM1Q13496 603 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 FOXR2Q6PJQ5 311 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 ZNF788Q6ZQV5 615 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 LHFPL2Q6ZUX7 228 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 DDX46Q7L014 1031 aaKnown RBP3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 LNX2Q8N448 690 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 DDB2Q92466 427 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 ANKS1AQ92625 1134 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 RAB24Q969Q5 203 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 ZNF778Q96MU6 729 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 C14orf119Q9NWQ9 140 aa3.29□□□□□ -1.88
SNORA40.14-201ENST00000516543 KIAA0391O15091 583 aaKnown RBP3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 GPR32O75388 356 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 GATA3P23771 443 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 MAPK10P53779 464 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 ATP8B2P98198 1209 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 SRSF4Q08170 494 aaKnown RBP3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 MALLQ13021 153 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 AKNAD1Q5T1N1 836 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 DCBLD1Q8N8Z6 715 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 TBC1D15Q8TC07 691 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 CASKIN2Q8WXE0 1202 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 TFAP2BQ92481 460 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 DPF2Q92785 391 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 TLR10Q9BXR5 811 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLC29A3Q9BZD2 475 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 TMEM140Q9NV12 185 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLC17A6Q9P2U8 582 aa3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 APOBEC2Q9Y235 224 aaKnown RBP3.28□□□□□ -1.88
SNORA40.14-201ENST00000516543 PEX1O43933 1283 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 SBK3P0C264 359 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 KIAA0895LQ68EN5 471 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 PEG10Q86TG7 708 aaKnown RBP3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 FITM2Q8N6M3 262 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 SCARB1Q8WTV0 552 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 NUP133Q8WUM0 1156 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 LPIN2Q92539 896 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 DPF1Q92782 380 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 TMEM125Q96AQ2 219 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 PNKPQ96T60 521 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 ADI1Q9BV57 179 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 CPNE5Q9HCH3 593 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 CCM2LQ9NUG4 571 aaPredicted RBP3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 DNAJC28Q9NX36 388 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 DNM3Q9UQ16 869 aa3.27□□□□□ -1.89
SNORA40.14-201ENST00000516543 MYBBP1AQ9BQG0 1328 aaKnown RBP3.26□□□□□ -1.89
SNORA40.14-201ENST00000516543 TRGV11A0A075B6L2 103 aa3.26□□□□□ -1.89
SNORA40.14-201ENST00000516543 MANSC4A6NHS7 340 aaPredicted RBP3.26□□□□□ -1.89
SNORA40.14-201ENST00000516543 ENPP3O14638 875 aa3.26□□□□□ -1.89
SNORA40.14-201ENST00000516543 YY2O15391 372 aa3.26□□□□□ -1.89
SNORA40.14-201ENST00000516543 PROP1O75360 226 aa3.26□□□□□ -1.89
SNORA40.14-201ENST00000516543 PRKD3O94806 890 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms