RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TCF15Q12870 199 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 DHX8Q14562 1220 aaKnown RBP19.08■□□□□ 0.64
DDX41-217ENST00000515562 MCM6Q14566 821 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 SLC10A6Q3KNW5 377 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 AXDND1Q5T1B0 1012 aaPredicted RBP19.08■□□□□ 0.64
DDX41-217ENST00000515562 SLC8B1Q6J4K2 584 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 LRRC15Q8TF66 581 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 LARP4BQ92615 738 aaKnown RBP19.08■□□□□ 0.64
DDX41-217ENST00000515562 C18orf25Q96B23 403 aaPredicted RBP19.08■□□□□ 0.64
DDX41-217ENST00000515562 INTS4Q96HW7 963 aaKnown RBP19.08■□□□□ 0.64
DDX41-217ENST00000515562 FBXL21Q9UKT6 434 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 TBX20Q9UMR3 447 aa19.08■□□□□ 0.64
DDX41-217ENST00000515562 PIGRP01833 764 aa19.07■□□□□ 0.64
DDX41-217ENST00000515562 CXCL8P10145 99 aa19.07■□□□□ 0.64
DDX41-217ENST00000515562 MCM4P33991 863 aa19.07■□□□□ 0.64
DDX41-217ENST00000515562 SEZ6Q53EL9 994 aa19.07■□□□□ 0.64
DDX41-217ENST00000515562 VARS2Q5ST30 1063 aaKnown RBP19.07■□□□□ 0.64
DDX41-217ENST00000515562 ASTLQ6HA08 431 aaPredicted RBP19.07■□□□□ 0.64
DDX41-217ENST00000515562 GRASPQ7Z6J2 395 aaPredicted RBP19.07■□□□□ 0.64
DDX41-217ENST00000515562 ALYREFQ86V81 257 aaKnown RBP19.07■□□□□ 0.64
DDX41-217ENST00000515562 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
DDX41-217ENST00000515562 H7C4K7 107 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 CCL16O15467 120 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 TRAK2O60296 914 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 SYT1P21579 422 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 TXLNAP40222 546 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 MRE11P49959 708 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 CLCN5P51795 746 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 PPP2R3AQ06190 1150 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 PTPAQ15257 358 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 RSPO2Q6UXX9 243 aaPredicted RBP19.06■□□□□ 0.64
DDX41-217ENST00000515562 ZNF461Q8TAF7 563 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 SUSD3Q96L08 255 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 ZHX3Q9H4I2 956 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 STK17AQ9UEE5 414 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 CCDC39Q9UFE4 941 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 TUBGCP4Q9UGJ1 667 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 CDH7Q9ULB5 785 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 CLIC4Q9Y696 253 aa19.06■□□□□ 0.64
DDX41-217ENST00000515562 TTC26A0AVF1 554 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 ANHXE9PGG2 379 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 XPOTO43592 962 aaKnown RBP19.05■□□□□ 0.64
DDX41-217ENST00000515562 GALR2O43603 387 aaPredicted RBP19.05■□□□□ 0.64
DDX41-217ENST00000515562 SRFP11831 508 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 DDIT3P35638 169 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 ROR1Q01973 937 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 RESTQ13127 1097 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 HTR4Q13639 388 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 SLC44A3Q8N4M1 653 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 TMEM105Q8N8V8 129 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 KRI1Q8N9T8 703 aaKnown RBP19.05■□□□□ 0.64
DDX41-217ENST00000515562 APPL2Q8NEU8 664 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 RSAD2Q8WXG1 361 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 KIF12Q96FN5 646 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 TSPAN18Q96SJ8 248 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 BACH2Q9BYV9 841 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 HAPLN2Q9GZV7 340 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 WNT16Q9UBV4 365 aa19.05■□□□□ 0.64
DDX41-217ENST00000515562 OGTO15294 1046 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 NARSO43776 548 aaKnown RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 FAM189A1O60320 539 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 CYP3A5P20815 502 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 LRPAP1P30533 357 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 ELF1P32519 619 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 PABPC1LQ4VXU2 614 aaKnown RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 CWF19L1Q69YN2 538 aaKnown RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 ZNF280DQ6N043 979 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 MAP4K3Q8IVH8 894 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 SIX5Q8N196 739 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 FLCNQ8NFG4 579 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 EPSTI1Q96J88 318 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 FBXO2Q9UK22 296 aaPredicted RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 KCNH3Q9ULD8 1083 aa19.04■□□□□ 0.64
DDX41-217ENST00000515562 UBQLN1Q9UMX0 589 aaKnown RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 SRPRBQ9Y5M8 271 aaKnown RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 MORC2Q9Y6X9 1032 aaPredicted RBP19.04■□□□□ 0.64
DDX41-217ENST00000515562 A0A0B4J269 797 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 ARHGEF37A1IGU5 675 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 WDR27A2RRH5 827 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 K7ELQ4 463 aaPredicted RBP19.03■□□□□ 0.64
DDX41-217ENST00000515562 PRRG1O14668 218 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 TBC1D4O60343 1298 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 ABLIM3O94929 683 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 CFHP08603 1231 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 ATF2P15336 505 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 AOC1P19801 751 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 MARCKSP29966 332 aaPredicted RBP19.03■□□□□ 0.64
DDX41-217ENST00000515562 TNFSF9P41273 254 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 NTHL1P78549 312 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 GTF2BQ00403 316 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 MRPL58Q14197 206 aaKnown RBP19.03■□□□□ 0.64
DDX41-217ENST00000515562 CTXN3Q4LDR2 81 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 MTSS1LQ765P7 747 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 FGF13Q92913 245 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 FIZ1Q96SL8 496 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 MSTO1Q9BUK6 570 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 ST6GALNAC4Q9H4F1 302 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 RPF1Q9H9Y2 349 aaKnown RBP19.03■□□□□ 0.64
DDX41-217ENST00000515562 FBXL5Q9UKA1 691 aa19.03■□□□□ 0.64
DDX41-217ENST00000515562 PCDHB8Q9UN66 801 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms