RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 NAGPAQ9UK23 515 aa9.85□□□□□ -0.83
CPNE4-213ENST00000515418 MROH7Q68CQ1 1323 aa9.85□□□□□ -0.83
CPNE4-213ENST00000515418 KIF2AO00139 706 aaPredicted RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 KRT5P13647 590 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 TNFAIP3P21580 790 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 RFX1P22670 979 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 CASQ1P31415 396 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 NOP14P78316 857 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 KIF5AQ12840 1032 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 NFX1Q12986 1120 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 ARHGEF6Q15052 776 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 SURF1Q15526 300 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 NOTUMQ6P988 496 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 NOP9Q86U38 636 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 FAM228AQ86W67 206 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 SLC35F6Q8N357 371 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 SYT11Q9BT88 431 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 UNC93B1Q9H1C4 597 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 TRPV6Q9H1D0 765 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 NXF3Q9H4D5 531 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 TAS2R14Q9NYV8 317 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 SIX4Q9UIU6 781 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 RIOK3O14730 519 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 KRT86O43790 486 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 ZC3H11AO75152 810 aaKnown RBP eCLIP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 IL18RAPO95256 599 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 ASS1P00966 412 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 TNNC2P02585 160 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 CHRNB2P17787 502 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 GRM5P41594 1212 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 AP3M2P53677 418 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 GCNT1Q02742 428 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 TRPC3Q13507 836 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 CUL2Q13617 745 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 MTFR1Q15390 333 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 UBXN11Q5T124 520 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 RPUSD2Q8IZ73 545 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 C1orf127Q8N9H9 656 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 ANKRD36BP1Q96IX9 119 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 ZMAT2Q96NC0 199 aaKnown RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 AGPAT1Q99943 283 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 TRIM6Q9C030 488 aaPredicted RBP9.84□□□□□ -0.83
CPNE4-213ENST00000515418 ST3GAL5Q9UNP4 418 aa9.84□□□□□ -0.83
CPNE4-213ENST00000515418 SCN1AP35498 2009 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 M0QZ92 97 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ENC1O14682 589 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 BUB1O43683 1085 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 URI1O94763 535 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 MOCS3O95396 460 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ITGB3P05106 788 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 MMEP08473 750 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 WEE2P0C1S8 567 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 CCDC172P0C7W6 258 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 BMS1Q14692 1282 aaKnown RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 NAB2Q15742 525 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 SGSM1Q2NKQ1 1148 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 GLRA4Q5JXX5 417 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 RSPH3Q86UC2 560 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 SESTD1Q86VW0 696 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 GLT1D1Q96MS3 346 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 PCDHB18PQ96TA0 734 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 CCDC94Q9BW85 323 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 SENP6Q9GZR1 1112 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 XYLT2Q9H1B5 865 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 AGO3Q9H9G7 860 aaKnown RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 NXF1Q9UBU9 619 aaKnown RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 NOD1Q9Y239 953 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 DAAM1Q9Y4D1 1078 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 PCDHB4Q9Y5E5 795 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 TRPV2Q9Y5S1 764 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 RPS6KA5O75582 802 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 CYP11B1P15538 503 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 CD58P19256 250 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ACO1P21399 889 aaKnown RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 TMEM132DQ14C87 1099 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 DCAF4L1Q3SXM0 396 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF394Q53GI3 561 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 TWF2Q6IBS0 349 aaKnown RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 TMEM270Q6UE05 265 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 SCARA5Q6ZMJ2 495 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF662Q6ZS27 426 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 VPS36Q86VN1 386 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ARRDC4Q8NCT1 418 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 CXorf38Q8TB03 319 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 C18orf25Q96B23 403 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 ASB7Q9H672 318 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 PARP2Q9UGN5 583 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 NOCTQ9UK39 431 aaKnown RBP9.83□□□□□ -0.84
CPNE4-213ENST00000515418 NENFQ9UMX5 172 aa9.83□□□□□ -0.84
CPNE4-213ENST00000515418 A0A1W2PQ45 241 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 A0A1W2PQY0 241 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 MEIS3P2A8K0S8 358 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 PJA2O43164 708 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms