RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 NEU2Q9Y3R4 380 aa18.68■□□□□ 0.58
SNX2-213ENST00000514949 DOCK1Q14185 1865 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 SPATA31C2B4DYI2 1134 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 H0YHG0 523 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 PSTPIP1O43586 416 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 RASSF9O75901 435 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 PRKCEQ02156 737 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 ANKRD20A8PQ5CZ79 823 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 ATL2Q8NHH9 583 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 C1orf54Q8WWF1 131 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 POLR3FQ9H1D9 316 aaPredicted RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 CDC42EP4Q9H3Q1 356 aaKnown RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 INTS9Q9NV88 658 aaKnown RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 ZNF112Q9UJU3 913 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 UMODL1Q5DID0 1318 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 GAS8O95995 478 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 HLA-DRAP01903 254 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 RPS12P25398 132 aaKnown RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 NSFP46459 744 aaKnown RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 ACTR2P61160 394 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 ITIH4Q14624 930 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 SWT1Q5T5J6 900 aaKnown RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 RELL1Q8IUW5 271 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 BICD1Q96G01 975 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 TRIM7Q9C029 511 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 CHST7Q9NS84 486 aa18.67■□□□□ 0.58
SNX2-213ENST00000514949 SEPT9Q9UHD8 586 aaPredicted RBP18.67■□□□□ 0.58
SNX2-213ENST00000514949 DSG3P32926 999 aa18.66■□□□□ 0.58
SNX2-213ENST00000514949 LIG4P49917 911 aa18.66■□□□□ 0.58
SNX2-213ENST00000514949 TDRD10Q5VZ19 366 aaKnown RBP18.66■□□□□ 0.58
SNX2-213ENST00000514949 PHF13Q86YI8 300 aaPredicted RBP18.66■□□□□ 0.58
SNX2-213ENST00000514949 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
SNX2-213ENST00000514949 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
SNX2-213ENST00000514949 SELENOSQ9BQE4 189 aa18.66■□□□□ 0.58
SNX2-213ENST00000514949 SIP14410 1827 aa18.66■□□□□ 0.58
SNX2-213ENST00000514949 DNM1LO00429 736 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SORBS3O60504 671 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 TTC4O95801 387 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 CCNG2Q16589 344 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SLFN12LQ6IEE8 588 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SNRNP48Q6IEG0 339 aaKnown RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 PLEKHA7Q6IQ23 1121 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 MIS18BP1Q6P0N0 1132 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 CRELD2Q6UXH1 353 aaPredicted RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 EXOC3L1Q86VI1 746 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 KATNAL2Q8IYT4 538 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 CCDC197Q8NCU1 140 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 HERPUD2Q9BSE4 406 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 MRPL47Q9HD33 250 aaKnown RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 PHIPQ8WWQ0 1821 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 MYH9P35579 1960 aaKnown RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 GOLGA6L7A0A1B0GV03 622 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 ATG7O95352 703 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 VNN1O95497 513 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 EGFRP00533 1210 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SUPT20HL2P0C7V6 817 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 CUL2Q13617 745 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 CNGA2Q16280 664 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 GNPTABQ3T906 1256 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SUPT20HL1Q3ZLR7 823 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 LIN9Q5TKA1 542 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 SMYD5Q6GMV2 418 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 ABRAQ8N0Z2 381 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 ZNF280CQ8ND82 737 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 ELMO3Q96BJ8 720 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 JPH2Q9BR39 696 aaPredicted RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 PORCNQ9H237 461 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 CYP39A1Q9NYL5 469 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 ASIC3Q9UHC3 531 aa18.65■□□□□ 0.58
SNX2-213ENST00000514949 AGO2Q9UKV8 859 aaKnown RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 MAFBQ9Y5Q3 323 aaPredicted RBP18.65■□□□□ 0.58
SNX2-213ENST00000514949 LDHAP00338 332 aaKnown RBP18.64■□□□□ 0.57
SNX2-213ENST00000514949 ATP5DP30049 168 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 NLRP11P59045 1033 aaKnown RBP18.64■□□□□ 0.57
SNX2-213ENST00000514949 NOMO3P69849 1222 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 PPARDQ03181 441 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 EMC2Q15006 297 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 RHOT1Q8IXI2 618 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 ANKS4BQ8N8V4 417 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 BBOF1Q8ND07 529 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 DHX33Q9H6R0 707 aaKnown RBP18.64■□□□□ 0.57
SNX2-213ENST00000514949 TELO2Q9Y4R8 837 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 CALCAP01258 141 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 TNNI1P19237 187 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 NAMPTP43490 491 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 WNT7BP56706 349 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
SNX2-213ENST00000514949 STRN3Q13033 797 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 MAMLD1Q13495 774 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 DCAF15Q66K64 600 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 EXD1Q8NHP7 514 aa18.64■□□□□ 0.57
SNX2-213ENST00000514949 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.64■□□□□ 0.57
SNX2-213ENST00000514949 DDX23Q9BUQ8 820 aaKnown RBP18.64■□□□□ 0.57
SNX2-213ENST00000514949 DOCK5Q9H7D0 1870 aa18.63■□□□□ 0.57
SNX2-213ENST00000514949 SMIM23A6NLE4 172 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms