RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 MBD3O95983 291 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 POU3F3P20264 500 aaPredicted RBP18.86■□□□□ 0.61
DDR1-270ENST00000513043 NR2F2P24468 414 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 PMS1P54277 932 aaKnown RBP18.86■□□□□ 0.61
DDR1-270ENST00000513043 POU5F1Q01860 360 aaKnown RBP18.86■□□□□ 0.61
DDR1-270ENST00000513043 CYP24A1Q07973 514 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 ZCWPW2Q504Y3 356 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 COBLL1Q53SF7 1204 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 SPATA1Q5VX52 437 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 DCLRE1AQ6PJP8 1040 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 MAFAQ8NHW3 353 aaPredicted RBP18.86■□□□□ 0.61
DDR1-270ENST00000513043 CCDC127Q96BQ5 260 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 DDX27Q96GQ7 796 aaKnown RBP18.86■□□□□ 0.61
DDR1-270ENST00000513043 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 DERAQ9Y315 318 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 C2CD2Q9Y426 696 aa18.86■□□□□ 0.61
DDR1-270ENST00000513043 PRRC2BQ5JSZ5 2229 aaKnown RBP18.86■□□□□ 0.61
DDR1-270ENST00000513043 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 PPP1R3GB7ZBB8 358 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 C2CD2LO14523 706 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 PPEF2O14830 753 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 DLATP10515 647 aaKnown RBP18.85■□□□□ 0.61
DDR1-270ENST00000513043 CYP3A5P20815 502 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 RPL9P32969 192 aaKnown RBP18.85■□□□□ 0.61
DDR1-270ENST00000513043 BRCC3P46736 316 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 TIGD5Q53EQ6 642 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 ANKRD40Q6AI12 368 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 ADGRD2Q7Z7M1 963 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 RBM23Q86U06 439 aaKnown RBP18.85■□□□□ 0.61
DDR1-270ENST00000513043 SLC9A9Q8IVB4 645 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 TSPAN18Q96SJ8 248 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 POP1Q99575 1024 aaKnown RBP18.85■□□□□ 0.61
DDR1-270ENST00000513043 TSG101Q99816 390 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 ZBP1Q9H171 429 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 NSUN3Q9H649 340 aaKnown RBP18.85■□□□□ 0.61
DDR1-270ENST00000513043 DPP3Q9NY33 737 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 CTNND2Q9UQB3 1225 aa18.85■□□□□ 0.61
DDR1-270ENST00000513043 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.618e-6■■■■■ 107
DDR1-270ENST00000513043 HIDE1A8MVS5 230 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 PSMA7O14818 248 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 FSCN2O14926 492 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 CXCL14O95715 111 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 SOD2P04179 222 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 ADAM9Q13443 819 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 SKIV2LQ15477 1246 aaKnown RBP18.84■□□□□ 0.61
DDR1-270ENST00000513043 FAM171A1Q5VUB5 890 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 CENPPQ6IPU0 288 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 CD300LGQ6UXG3 332 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 TRIML1Q8N9V2 468 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 NELFBQ8WX92 580 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 FNBP1Q96RU3 617 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 HERC2P3Q9BVR0 1158 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 MTMR12Q9C0I1 747 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 FRMD4BQ9Y2L6 1034 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 NUB1Q9Y5A7 615 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 ATG2AQ2TAZ0 1938 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 MYO7AQ13402 2215 aa18.84■□□□□ 0.61
DDR1-270ENST00000513043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.83■□□□□ 0.6
DDR1-270ENST00000513043 TMEM189-UBE2V1I3L0A0 370 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 TMEM191BP0C7N4 346 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 CTSAP10619 480 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 TNNI1P19237 187 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 CCNE1P24864 410 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 RPL13P26373 211 aaKnown RBP18.83■□□□□ 0.6
DDR1-270ENST00000513043 LRPAP1P30533 357 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 GTF2F1P35269 517 aaKnown RBP eCLIP18.83■□□□□ 0.68e-7■■■■□ 24.7
DDR1-270ENST00000513043 STX17P56962 302 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 SMC1AQ14683 1233 aaKnown RBP18.83■□□□□ 0.6
DDR1-270ENST00000513043 PSMD6Q15008 389 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 SURF1Q15526 300 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 NFIL3Q16649 462 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 EDRF1Q3B7T1 1238 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 C9orf57Q5W0N0 161 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 KIAA1841Q6NSI8 718 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 CEP57Q86XR8 500 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 OR5B17Q8NGF7 314 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 PLEKHO2Q8TD55 490 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 DHTKD1Q96HY7 919 aaPredicted RBP18.83■□□□□ 0.6
DDR1-270ENST00000513043 MFSD14AQ96MC6 490 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 IGFLR1Q9H665 355 aa18.83■□□□□ 0.6
DDR1-270ENST00000513043 NGRNQ9NPE2 291 aaKnown RBP18.83■□□□□ 0.6
DDR1-270ENST00000513043 PER2O15055 1255 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 AKAP3O75969 853 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 EFEMP2O95967 443 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 URODP06132 367 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 PPP1R2P41236 205 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 NRIP1P48552 1158 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 GLUD2P49448 558 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 MYBPC2Q14324 1141 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 BMS1Q14692 1282 aaKnown RBP18.82■□□□□ 0.6
DDR1-270ENST00000513043 PTPN14Q15678 1187 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 SCARA3Q6AZY7 606 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 NT5DC4Q86YG4 428 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
DDR1-270ENST00000513043 CACTINQ8WUQ7 758 aaKnown RBP18.82■□□□□ 0.6
DDR1-270ENST00000513043 ANKRD36BP1Q96IX9 119 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 CGRRF1Q99675 332 aa18.82■□□□□ 0.6
DDR1-270ENST00000513043 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
DDR1-270ENST00000513043 TLE6Q9H808 572 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms