RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 LILRA6Q6PI73 481 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 PPFIBP1Q86W92 1011 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 TMEM130Q8N3G9 435 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 HASPINQ8TF76 798 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 SUSD6Q92537 303 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 EMILIN2Q9BXX0 1053 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 CD207Q9UJ71 328 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 UBQLN1Q9UMX0 589 aaKnown RBP12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 DERAQ9Y315 318 aa12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.78□□□□□ -0.36
HMGXB3-203ENST00000510472 C2CD2LO14523 706 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 EXTL3O43909 919 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 IL9P15248 144 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 EPCAMP16422 314 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 BRCC3P46736 316 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 AARSP49588 968 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 PPP2R3AQ06190 1150 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 PSMD2Q13200 908 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 MRPL58Q14197 206 aaKnown RBP12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 SMAD2Q15796 467 aaKnown RBP12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 KMT5BQ4FZB7 885 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 JADE1Q6IE81 842 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 KIAA1841Q6NSI8 718 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 SYCP3Q8IZU3 236 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 KIAA0895Q8NCT3 520 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 CASP10Q92851 521 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 CLSTN3Q9BQT9 956 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 SLC39A2Q9NP94 309 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 C2CD2Q9Y426 696 aa12.77□□□□□ -0.37
HMGXB3-203ENST00000510472 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 ANO9A1A5B4 782 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 LDHAP00338 332 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 NFICP08651 508 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 KLRC2P26717 231 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 SNRPFP62306 86 aaKnown RBP12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 CLUL1Q15846 466 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 TMEM174Q8WUU8 243 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 SUSD3Q96L08 255 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 NECAB3Q96P71 396 aaPredicted RBP12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 FAM213AQ9BRX8 229 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 AGPAT3Q9NRZ7 376 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 UBE4BO95155 1302 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 MUC3AQ02505 3323 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 MYH11P35749 1972 aa12.76□□□□□ -0.37
HMGXB3-203ENST00000510472 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 M0QZQ0 153 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 PIRO00625 290 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 ADAM12O43184 909 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 TRAPPC3O43617 180 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 IL18RAPO95256 599 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 ADH1AP07327 375 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 KNOP1Q1ED39 458 aaKnown RBP12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 C9orf57Q5W0N0 161 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 NT5DC4Q86YG4 428 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 EFCAB13Q8IY85 973 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 TMEM87AQ8NBN3 555 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 CXorf38Q8TB03 319 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 SPATA20Q8TB22 786 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 HDAC7Q8WUI4 952 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 UHRF1Q96T88 793 aaPredicted RBP12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 KCTD10Q9H3F6 313 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 MTRRQ9UBK8 725 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 PRKAG3Q9UGI9 489 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 USP15Q9Y4E8 981 aaPredicted RBP12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 BACE2Q9Y5Z0 518 aa12.75□□□□□ -0.37
HMGXB3-203ENST00000510472 GOLGA8IPA6NC78 632 aa12.74□□□□□ -0.37
HMGXB3-203ENST00000510472 GOLGA8JA6NMD2 632 aa12.74□□□□□ -0.37
HMGXB3-203ENST00000510472 I3L4J1 428 aa12.74□□□□□ -0.37
HMGXB3-203ENST00000510472 PPEF2O14830 753 aa12.74□□□□□ -0.37
HMGXB3-203ENST00000510472 SYN3O14994 580 aa12.74□□□□□ -0.37
HMGXB3-203ENST00000510472 SPTLC1O15269 473 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms