RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 BICD1Q96G01 975 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 MYADMQ96S97 322 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 PANK2Q9BZ23 570 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 ZHX3Q9H4I2 956 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 KCNK12Q9HB15 430 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 DOCK8Q8NF50 2099 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 CLUHO75153 1309 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 MYMKA6NI61 221 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 LACTBL1A8MY62 500 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 ANKRD63C9JTQ0 380 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 K7ENM7 598 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 MATR3P43243 847 aaKnown RBP eCLIP19.56■□□□□ 0.72
TPM3-220ENST00000509601 NASPP49321 788 aaPredicted RBP19.56■□□□□ 0.72
TPM3-220ENST00000509601 LIG4P49917 911 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 ZC2HC1CQ53FD0 456 aaPredicted RBP19.56■□□□□ 0.72
TPM3-220ENST00000509601 ANKS3Q6ZW76 656 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 DYMQ7RTS9 669 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 ZNF720Q7Z2F6 126 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 MAP4K3Q8IVH8 894 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 STAMQ92783 540 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 DNAJC19Q96DA6 116 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 KCNH6Q9H252 994 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 ST6GALNAC4Q9H4F1 302 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 PIDD1Q9HB75 910 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 STK17AQ9UEE5 414 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 TUBGCP4Q9UGJ1 667 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 CDY1Q9Y6F8 540 aa19.56■□□□□ 0.72
TPM3-220ENST00000509601 A0A087X0B3 334 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 A0A0B4J269 797 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 OGTO15294 1046 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 TBCAO75347 108 aaKnown RBP19.55■□□□□ 0.72
TPM3-220ENST00000509601 C8AP07357 584 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 HNRNPA1P09651 372 aaKnown RBP eCLIP19.55■□□□□ 0.72
TPM3-220ENST00000509601 ENOX2Q16206 610 aaKnown RBP19.55■□□□□ 0.72
TPM3-220ENST00000509601 UVSSAQ2YD98 709 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 VARS2Q5ST30 1063 aaKnown RBP19.55■□□□□ 0.72
TPM3-220ENST00000509601 AXDND1Q5T1B0 1012 aaPredicted RBP19.55■□□□□ 0.72
TPM3-220ENST00000509601 KRI1Q8N9T8 703 aaKnown RBP19.55■□□□□ 0.72
TPM3-220ENST00000509601 LINC00301Q8NCQ3 95 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 STRA6Q9BX79 667 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 EPS15L1Q9UBC2 864 aa19.55■□□□□ 0.72
TPM3-220ENST00000509601 HNRNPDLO14979 420 aaKnown RBP19.54■□□□□ 0.72
TPM3-220ENST00000509601 SYN3O14994 580 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 ABLIM3O94929 683 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 CYP3A5P20815 502 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 LRPAP1P30533 357 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 GBP2P32456 591 aaPredicted RBP19.54■□□□□ 0.72
TPM3-220ENST00000509601 PPM1LQ5SGD2 360 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 SLC8B1Q6J4K2 584 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 SV2BQ7L1I2 683 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 GRASPQ7Z6J2 395 aaPredicted RBP19.54■□□□□ 0.72
TPM3-220ENST00000509601 RSAD2Q8WXG1 361 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 DDX12PQ92771 950 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 SUSD3Q96L08 255 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 IKZF4Q9H2S9 585 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 IGSF9Q9P2J2 1179 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 TFIP11Q9UBB9 837 aaKnown RBP19.54■□□□□ 0.72
TPM3-220ENST00000509601 CPSF3Q9UKF6 684 aaKnown RBP19.54■□□□□ 0.72
TPM3-220ENST00000509601 NUB1Q9Y5A7 615 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 STYXL1Q9Y6J8 313 aa19.54■□□□□ 0.72
TPM3-220ENST00000509601 TISP43B9A030 160 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 CCL16O15467 120 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 PPP1R37O75864 691 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 LAMP2P13473 410 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 AVPR2P30518 371 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 HOXA9P31269 272 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 VCPP55072 806 aaKnown RBP19.53■□□□□ 0.72
TPM3-220ENST00000509601 NTHL1P78549 312 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 TDGQ13569 410 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 KYAT1Q16773 422 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 LIN9Q5TKA1 542 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 SFR1Q86XK3 245 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 ZNF461Q8TAF7 563 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 KIF12Q96FN5 646 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 MSTO1Q9BUK6 570 aa19.53■□□□□ 0.72
TPM3-220ENST00000509601 RPF1Q9H9Y2 349 aaKnown RBP19.53■□□□□ 0.72
TPM3-220ENST00000509601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.53■□□□□ 0.723e-11■□□□□ 9
TPM3-220ENST00000509601 UBQLN1Q9UMX0 589 aaKnown RBP19.53■□□□□ 0.72
TPM3-220ENST00000509601 PDCD11Q14690 1871 aaKnown RBP19.53■□□□□ 0.72
TPM3-220ENST00000509601 POU2F2P09086 479 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 ABCD1P33897 745 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 GUCY2FP51841 1108 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 ROR1Q01973 937 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 CCDC73Q6ZRK6 1079 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 RTL10Q7L3V2 364 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 SUGP1Q8IWZ8 645 aaKnown RBP19.52■□□□□ 0.72
TPM3-220ENST00000509601 SLC7A14Q8TBB6 771 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 FBXL5Q9UKA1 691 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 NOTCH4Q99466 2003 aa19.52■□□□□ 0.72
TPM3-220ENST00000509601 WDR27A2RRH5 827 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 M0QZQ0 153 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 NARSO43776 548 aaKnown RBP19.51■□□□□ 0.71
TPM3-220ENST00000509601 FSHRP23945 695 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 ADSSP30520 456 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 TXLNAP40222 546 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 PPP2R3AQ06190 1150 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 KCNA1Q09470 495 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 STK38Q15208 465 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 SLC44A3Q8N4M1 653 aa19.51■□□□□ 0.71
TPM3-220ENST00000509601 PRSS33Q8NF86 280 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms