RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RPAP2Q8IXW5 612 aaPredicted RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 CEP57L1Q8IYX8 460 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 CCAR2Q8N163 923 aaKnown RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 CARNMT1Q8N4J0 409 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 TAB3Q8N5C8 712 aaPredicted RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 NKAPQ8N5F7 415 aaKnown RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 USP38Q8NB14 1042 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 HPS3Q969F9 1004 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 EPSTI1Q96J88 318 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 RBM14Q96PK6 669 aaKnown RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 ELAC2Q9BQ52 826 aaKnown RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 EIF2AK1Q9BQI3 630 aaKnown RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 KATNAL1Q9BW62 490 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 RTFDC1Q9BY42 306 aaPredicted RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 ASPSCR1Q9BZE9 553 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 TLR9Q9NR96 1032 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 ANKEF1Q9NU02 776 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 RNF19AQ9NV58 838 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 WDR35Q9P2L0 1181 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 PPARGC1AQ9UBK2 798 aaKnown RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 CFDP1Q9UEE9 299 aaPredicted RBP5□□□□□ -1.61
NIPBL-206ENST00000509429 STK39Q9UEW8 545 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF112Q9UJU3 913 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 MTUS1Q9ULD2 1270 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 OAZ3Q9UMX2 235 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 DUSP12Q9UNI6 340 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 CNPY2Q9Y2B0 182 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 PCDHB14Q9Y5E9 798 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 CUX1P39880 1505 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 NINLQ9Y2I6 1382 aa5□□□□□ -1.61
NIPBL-206ENST00000509429 HNRNPCL2B2RXH8 293 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 H0YC42 278 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 PRPF3O43395 683 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 NPHS1O60500 1241 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 NMT2O60551 498 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 HNRNPCL1O60812 293 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF254O75437 659 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 OFD1O75665 1012 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 PARP1P09874 1014 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 MUTP22033 750 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 RPS6KB1P23443 525 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 RDXP35241 583 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 HOXD12P35452 270 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 MAP2K2P36507 400 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 SLC6A11P48066 632 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 POLD2P49005 469 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 PEX5P50542 639 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 AKAP17AQ02040 695 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 GFOD2Q3B7J2 385 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF568Q3ZCX4 644 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 MUM1L1Q5H9M0 696 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 AKNAD1Q5T1N1 836 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 INTS11Q5TA45 600 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 CRTC1Q6UUV9 634 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 TMCO3Q6UWJ1 677 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 INTS8Q75QN2 995 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF771Q7L3S4 317 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 DGLUCYQ7Z3D6 616 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 TBC1D1Q86TI0 1168 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 SPATA2LQ8IUW3 424 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 GBP7Q8N8V2 638 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 SPERTQ8NA61 448 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 ATP11CQ8NB49 1132 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 MSANTD4Q8NCY6 345 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 PJA1Q8NG27 643 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 ACMSDQ8TDX5 336 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 STON2Q8WXE9 905 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 TOE1Q96GM8 510 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 HIC2Q96JB3 615 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 PPM1MQ96MI6 270 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 COG8Q96MW5 612 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 HERC2P3Q9BVR0 1158 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 TNMDQ9H2S6 317 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 ZCCHC17Q9NP64 241 aaKnown RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 NLRC4Q9NPP4 1024 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 PDP2Q9P2J9 529 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 HECAQ9UBI9 543 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-206ENST00000509429 CCNB3Q8WWL7 1395 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 CUL7Q14999 1698 aa4.99□□□□□ -1.61
NIPBL-206ENST00000509429 EVC2Q86UK5 1308 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 FHAD1B1AJZ9 1412 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CC2D2AQ9P2K1 1620 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TSPY2A6NKD2 308 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 NCAM2O15394 837 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TSPY3P0CV98 308 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TSPY8P0CW00 308 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 ATP6V1B1P15313 513 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 YY1P25490 414 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 ATP6V1E1P36543 226 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 GNL1P36915 607 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CCT5P48643 541 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CENPAP49450 140 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SEPHS1P49903 392 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 HDAC4P56524 1084 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 POLR2FP61218 127 aaKnown RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TSPY1Q01534 308 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 ITIH3Q06033 890 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 GRM1Q13255 1194 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms