RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SHC3Q92529 594 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 TATDN2Q93075 761 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 DEFB118Q96PH6 123 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 NXF3Q9H4D5 531 aaKnown RBP13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 PLEKHA5Q9HAU0 1116 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 SNTG2Q9NY99 539 aa13.57□□□□□ -0.24
LYSMD3-204ENST00000509384 ARVCFO00192 962 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 GPR182O15218 404 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 CAND2O75155 1236 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 LCA5LO95447 670 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 USP8P40818 1118 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 CYP27A1Q02318 531 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 GFPT1Q06210 699 aaPredicted RBP13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 NFX1Q12986 1120 aaKnown RBP13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 MTFR1Q15390 333 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 SLC18A3Q16572 532 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 TWF2Q6IBS0 349 aaKnown RBP13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 SNX27Q96L92 541 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 IFIH1Q9BYX4 1025 aaKnown RBP13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 RNF208Q9H0X6 261 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 TRPV6Q9H1D0 765 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 APOBEC3GQ9HC16 384 aaKnown RBP13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 ST3GAL5Q9UNP4 418 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 HES2Q9Y543 173 aa13.56□□□□□ -0.24
LYSMD3-204ENST00000509384 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 ZNF263O14978 683 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 RECQL4O94761 1208 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 ASS1P00966 412 aaKnown RBP13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 CST3P01034 146 aaPredicted RBP13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 KRT19P08727 400 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 GHRP10912 638 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 TBXAS1P24557 533 aaPredicted RBP13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 VAV2P52735 878 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 MYL6P60660 151 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 CUL2Q13617 745 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 SGSM1Q2NKQ1 1148 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 ZNF699Q32M78 642 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 FAM71AQ8IYT1 594 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 TXLNBQ8N3L3 684 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 JAKMIP2Q96AA8 810 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 APOL6Q9BWW8 343 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 LUC7LQ9NQ29 371 aaKnown RBP13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 ADAMTS1Q9UHI8 967 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 DERAQ9Y315 318 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
LYSMD3-204ENST00000509384 A0A0U1RQJ8 604 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 KRT5P13647 590 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 PAK2Q13177 524 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 BMS1Q14692 1282 aaKnown RBP13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 FAM26DQ5JW98 314 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ATRIPQ8WXE1 791 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ARID3AQ99856 593 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 TSGA10Q9BZW7 698 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ERVK-5Q9HDB9 667 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 PARP2Q9UGN5 583 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 SIX4Q9UIU6 781 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ITGA11Q9UKX5 1188 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 IPPQ9Y573 584 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 UMODL1Q5DID0 1318 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 A0A087X0T9 212 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 CYP26A1O43174 497 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ITGB3P05106 788 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 FAM228BP0C875 321 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 AKAP5P24588 427 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 CD52P31358 61 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 MAGEA1P43355 309 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 SCARA3Q6AZY7 606 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ZNF662Q6ZS27 426 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 HACE1Q8IYU2 909 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 TAF4BQ92750 862 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 NIF3L1Q9GZT8 377 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 AGO3Q9H9G7 860 aaKnown RBP13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 CNTN3Q9P232 1028 aa13.54□□□□□ -0.24
LYSMD3-204ENST00000509384 TRIP12Q14669 1992 aaPredicted RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 CTIFO43310 598 aaKnown RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 KRT86O43790 486 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 KIF5CO60282 957 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 SGPL1O95470 568 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 CKBP12277 381 aa13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 ZSCAN20P17040 1043 aaPredicted RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
LYSMD3-204ENST00000509384 PDE6CP51160 858 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms