RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 CYTH2Q99418 400 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 CCT7Q99832 543 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 OSBPL8Q9BZF1 889 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 LRRC27Q9C0I9 530 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 WHRNQ9P202 907 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TBK1Q9UHD2 729 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PPM1HQ9ULR3 514 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 FRMPD4Q14CM0 1322 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 ABCA3Q99758 1704 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PVALEFA0A1B0GWK0 134 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 LAD1O00515 517 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 DKC1O60832 514 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 USP1O94782 785 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 SLC5A2P31639 672 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 NAA20P61599 178 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 MMEL1Q495T6 779 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 AAGABQ6PD74 315 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 DHRS4L2Q6PKH6 230 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 RIN3Q8TB24 985 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 GIPC3Q8TF64 312 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 FAM172AQ8WUF8 416 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 RFFLQ8WZ73 363 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 COX4I2Q96KJ9 171 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TTC25Q96NG3 672 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PPP1R10Q96QC0 940 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PANX3Q96QZ0 392 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 RNF41Q9H4P4 317 aaPredicted RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 PIH1D3Q9NQM4 214 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 KANSL3Q9P2N6 904 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 ANKFY1Q9P2R3 1169 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 GRID1Q9ULK0 1009 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 SPO11Q9Y5K1 396 aa10.62□□□□□ -0.71
PDGFRA-207ENST00000509092 TNKSO95271 1327 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 DOCK2Q92608 1830 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 ADAM23O75077 832 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 OXSR1O95747 527 aaPredicted RBP10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 HOXA10P31260 410 aaPredicted RBP10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 FKBP3Q00688 224 aaKnown RBP10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 DLG1Q12959 904 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 MYLK3Q32MK0 819 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 PLEKHG4Q58EX7 1191 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 C16orf87Q6PH81 154 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 RHBDF2Q6PJF5 856 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 RFX8Q6ZV50 586 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 DHDDSQ86SQ9 333 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 TRIM59Q8IWR1 403 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 KLHL4Q9C0H6 718 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 TUT1Q9H6E5 874 aaKnown RBP10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 TRPC7Q9HCX4 862 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 HEY2Q9UBP5 337 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 RGPD5Q99666 1765 aa10.61□□□□□ -0.71
PDGFRA-207ENST00000509092 SPTLC1O15269 473 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 THAP12O43422 761 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CALM1P0DP23 149 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CALM2P0DP24 149 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CALM3P0DP25 149 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SCG2P13521 617 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CALML3P27482 149 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 RXRGP48443 463 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 TRPC1P48995 793 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 GALCP54803 685 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 MARSP56192 900 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 RASGRF1Q13972 1273 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CTTNQ14247 550 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 TMED2Q15363 201 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ZNF423Q2M1K9 1284 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 DEPDC1Q5TB30 811 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ERI1Q8IV48 349 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ALG3Q92685 438 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SKA1Q96BD8 255 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 BTBD9Q96Q07 612 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CCDC77Q9BR77 488 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SENP6Q9GZR1 1112 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 DRC3Q9H069 523 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 OSGEPQ9NPF4 335 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SELENONQ9NZV5 590 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 SMG5Q9UPR3 1016 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 GPC6Q9Y625 555 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 NUP188Q5SRE5 1749 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 ADAMTS3O15072 1205 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 CHKAP35790 457 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 COILP38432 576 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 AQP4P55087 323 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 STAT4Q14765 748 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 FAM91A1Q658Y4 838 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 TRABD2AQ86V40 505 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 TMPRSS6Q8IU80 811 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 BLIDQ8IZY5 108 aa10.6□□□□□ -0.71
PDGFRA-207ENST00000509092 TTC5Q8N0Z6 440 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms