RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CDC45O75419 566 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 PRSS23O95084 383 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 ADSLP30566 484 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 ID4P47928 161 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 RAP2BP61225 183 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 MRPS9P82933 396 aaKnown RBP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 PPP3CAQ08209 521 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 ADRM1Q16186 407 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 CYP2A13Q16696 494 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 SPDYE7PQ495Y7 208 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 RRP12Q5JTH9 1297 aaKnown RBP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 GORABQ5T7V8 394 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 OTUD7BQ6GQQ9 843 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 KCNK18Q7Z418 384 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 GRASPQ7Z6J2 395 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 FBXO18Q8NFZ0 1043 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 DDB2Q92466 427 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 RAX2Q96IS3 184 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 MRI1Q9BV20 369 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 RNPEPQ9H4A4 650 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 GALNT9Q9HCQ5 603 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 LRIT1Q9P2V4 623 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 ARPP21Q9UBL0 812 aaPredicted RBP3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 SLC23A1Q9UHI7 598 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 KCNE5Q9UJ90 142 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 MAPRE3Q9UPY8 281 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 NOX1Q9Y5S8 564 aa3.19□□□□□ -1.9
DEPDC1B-204ENST00000509006 AATKQ6ZMQ8 1374 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 SBNO2Q9Y2G9 1366 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 PDE8AO60658 829 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 SLC6A2P23975 617 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 ECHS1P30084 290 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 ALDH1A3P47895 512 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 SESN3P58005 492 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 HSD11B2P80365 405 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 MRPS35P82673 323 aaKnown RBP3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 CDK17Q00537 523 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 UBXN2BQ14CS0 331 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 MUM1Q2TAK8 710 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 EGFLAMQ63HQ2 1017 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 JAZF1Q86VZ6 243 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 CERS3Q8IU89 383 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 CCAR1Q8IX12 1150 aaKnown RBP3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 CMIPQ8IY22 773 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 FAM43AQ8N2R8 423 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 LNX2Q8N448 690 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 LEO1Q8WVC0 666 aaPredicted RBP3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 LMBR1Q8WVP7 490 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZBTB9Q96C00 473 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 RNF31Q96EP0 1072 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 UNKLQ9H9P5 680 aaKnown RBP3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 CASS4Q9NQ75 786 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 FBXO34Q9NWN3 711 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 USP25Q9UHP3 1055 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 PRKAB1Q9Y478 270 aa3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 MRPL42Q9Y6G3 142 aaKnown RBP3.18□□□□□ -1.9
DEPDC1B-204ENST00000509006 KCNAB3O43448 404 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 ZEB2O60315 1214 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 ULK1O75385 1050 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 POMCP01189 267 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 IL2RBP14784 551 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 FPR1P21462 350 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 VAV2P52735 878 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 ANO4Q32M45 955 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 AKNAD1Q5T1N1 836 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 GJC2Q5T442 439 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 KIAA0895LQ68EN5 471 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 SEM1Q6ZVN7 128 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 RNF180Q86T96 592 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 PQLC1Q8N2U9 271 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 Q8NA96 180 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 PDPRQ8NCN5 879 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 CASKIN2Q8WXE0 1202 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 AUTS2Q8WXX7 1259 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 DPF1Q92782 380 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 MYOCQ99972 504 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 AIFM2Q9BRQ8 373 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 GREM2Q9H772 168 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 IFT22Q9H7X7 185 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 IFT122Q9HBG6 1241 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 DMRT3Q9NQL9 472 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 RBM12Q9NTZ6 932 aaKnown RBP3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 TBCCD1Q9NVR7 557 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 MOCS1Q9NZB8 636 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 SLC17A6Q9P2U8 582 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 TBX22Q9Y458 520 aa3.17□□□□□ -1.9
DEPDC1B-204ENST00000509006 MANSC4A6NHS7 340 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 GPANK1O95872 356 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 CELA2AP08217 269 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 RAP2AP10114 183 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 MYCLP1P12525 358 aaPredicted RBP3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 ATP5JP18859 108 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 PCSK1P29120 753 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 SLC6A9P48067 706 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 CCT2P78371 535 aaKnown RBP3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 SEPT2Q15019 361 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 THNSL2Q86YJ6 484 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 USP7Q93009 1102 aa3.16□□□□□ -1.9
DEPDC1B-204ENST00000509006 FATE1Q969F0 183 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms