RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 IGSF21Q96ID5 467 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 CGRRF1Q99675 332 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 TMEM175Q9BSA9 504 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 SRRTQ9BXP5 876 aaKnown RBP11.21□□□□□ -0.61
PTPN20-220ENST00000508715 DNAJC25Q9H1X3 360 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 SLC28A3Q9HAS3 691 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 ALG13Q9NP73 1137 aaKnown RBP11.21□□□□□ -0.61
PTPN20-220ENST00000508715 INTS13Q9NVM9 706 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 PRG3Q9Y2Y8 225 aaPredicted RBP11.21□□□□□ -0.61
PTPN20-220ENST00000508715 DERAQ9Y315 318 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 C2CD2Q9Y426 696 aa11.21□□□□□ -0.61
PTPN20-220ENST00000508715 MTCL1Q9Y4B5 1905 aaKnown RBP11.21□□□□□ -0.62
PTPN20-220ENST00000508715 TMEM265A0A087WTH1 108 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 H3BNC9 293 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 PIRO00625 290 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 CETN3O15182 167 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 SPTLC1O15269 473 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 LRRN2O75325 713 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 FGF18O76093 207 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 KIF4AO95239 1232 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 C4BPAP04003 597 aaKnown RBP11.2□□□□□ -0.62
PTPN20-220ENST00000508715 TRIM49P0CI25 452 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 TRIM49CP0CI26 452 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 LAG3P18627 525 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 CYP3A5P20815 502 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-220ENST00000508715 PPP3CAQ08209 521 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 STX1AQ16623 288 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 SASS6Q6UVJ0 657 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 C15orf39Q6ZRI6 1047 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 FILIP1Q7Z7B0 1213 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 FAM186BQ8IYM0 893 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 HASPINQ8TF76 798 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 GDPD5Q8WTR4 605 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 SYAP1Q96A49 352 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-220ENST00000508715 CEP63Q96MT8 703 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 ZNF558Q96NG5 402 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 TSG101Q99816 390 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 MKNK1Q9BUB5 465 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 PLVAPQ9BX97 442 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 GPR62Q9BZJ7 368 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 MTMR12Q9C0I1 747 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 UBQLN1Q9UMX0 589 aaKnown RBP11.2□□□□□ -0.62
PTPN20-220ENST00000508715 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 PLXNA3P51805 1871 aa11.2□□□□□ -0.62
PTPN20-220ENST00000508715 BICDL2A1A5D9 508 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 TMEM189-UBE2V1I3L0A0 370 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 PODXLO00592 558 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 VNN1O95497 513 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 CST3P01034 146 aaPredicted RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 ALDH2P05091 517 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 RB1P06400 928 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 RPL13P26373 211 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 PSMC2P35998 433 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 BRCC3P46736 316 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 OR1G1P47890 313 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 ERVFC1P60507 584 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 TFAMQ00059 246 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 PLCB3Q01970 1234 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 BFSP1Q12934 665 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 HSP90AA2PQ14568 343 aaPredicted RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 ANO6Q4KMQ2 910 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SPOUT1Q5T280 376 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 TDRD10Q5VZ19 366 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 GPR153Q6NV75 609 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 NT5DC4Q86YG4 428 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 WDR49Q8IV35 697 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 CSGALNACT2Q8N6G5 542 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 ENOX1Q8TC92 643 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SLC35C1Q96A29 364 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 ELMO3Q96BJ8 720 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SAMD11Q96NU1 681 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 FAM193BQ96PV7 902 aaPredicted RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 TSPAN18Q96SJ8 248 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 PRDM12Q9H4Q4 367 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SAMSN1Q9NSI8 373 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SLC38A7Q9NVC3 462 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 ANO10Q9NW15 660 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 DPP3Q9NY33 737 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 PCDHGC5Q9Y5F6 944 aa11.19□□□□□ -0.62
PTPN20-220ENST00000508715 SPTBN5Q9NRC6 3674 aaKnown RBP11.19□□□□□ -0.62
PTPN20-220ENST00000508715 I3L4J1 428 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 SLC16A3O15427 465 aaKnown RBP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 ITGB3P05106 788 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 IRS1P35568 1242 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 ALDH7A1P49419 539 aaKnown RBP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 VAMP7P51809 220 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 GPM6BQ13491 265 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 IQCB1Q15051 598 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms