RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 C1orf112Q9NSG2 853 aa17.29■□□□□ 0.36
NFKB1-207ENST00000508584 SPTLC3Q9NUV7 552 aa17.29■□□□□ 0.36
NFKB1-207ENST00000508584 ARHGAP20Q9P2F6 1191 aa17.29■□□□□ 0.36
NFKB1-207ENST00000508584 ATP11BQ9Y2G3 1177 aa17.29■□□□□ 0.36
NFKB1-207ENST00000508584 EPN1Q9Y6I3 576 aaPredicted RBP17.29■□□□□ 0.36
NFKB1-207ENST00000508584 CEP290O15078 2479 aa17.29■□□□□ 0.36
NFKB1-207ENST00000508584 TRIP12Q14669 1992 aaPredicted RBP17.28■□□□□ 0.36
NFKB1-207ENST00000508584 ZSCAN12O43309 604 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 GHRP10912 638 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 CKBP12277 381 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 CYLC1P35663 651 aaPredicted RBP17.28■□□□□ 0.36
NFKB1-207ENST00000508584 EIF4A3P38919 411 aaKnown RBP17.28■□□□□ 0.36
NFKB1-207ENST00000508584 ARID5AQ03989 594 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 PAK2Q13177 524 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 LPIN1Q14693 890 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 TMEM132DQ14C87 1099 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 HGSNATQ68CP4 663 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 SLC39A5Q6ZMH5 540 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 ENOSF1Q7L5Y1 443 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 NT5DC4Q86YG4 428 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 PPM1KQ8N3J5 372 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 SNX27Q96L92 541 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 CCDC42Q96M95 316 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 DESI2Q9BSY9 194 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 GPR88Q9GZN0 384 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 NXF3Q9H4D5 531 aaKnown RBP17.28■□□□□ 0.36
NFKB1-207ENST00000508584 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
NFKB1-207ENST00000508584 DERAQ9Y315 318 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 C2CD2Q9Y426 696 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 HES2Q9Y543 173 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
NFKB1-207ENST00000508584 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 GFPT2O94808 682 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 NDUFA10O95299 355 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
NFKB1-207ENST00000508584 CCDC175P0C221 793 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 CD52P31358 61 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 GCNT1Q02742 428 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 KLHL30Q0D2K2 578 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
NFKB1-207ENST00000508584 TRPC3Q13507 836 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 TDRD12Q587J7 1177 aaKnown RBP17.27■□□□□ 0.36
NFKB1-207ENST00000508584 IRF2BP2Q7Z5L9 587 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 FAM126BQ8IXS8 530 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 CAGE1Q8TC20 777 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 KAT5Q92993 513 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 TATDN2Q93075 761 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 KREMEN1Q96MU8 473 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 APOL6Q9BWW8 343 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 IMPG2Q9BZV3 1241 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 TRMT1Q9NXH9 659 aaKnown RBP17.27■□□□□ 0.36
NFKB1-207ENST00000508584 PADI3Q9ULW8 664 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 IPPQ9Y573 584 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 ADGRG1Q9Y653 693 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 BZW2Q9Y6E2 419 aaKnown RBP17.27■□□□□ 0.36
NFKB1-207ENST00000508584 SZT2Q5T011 3432 aa17.27■□□□□ 0.36
NFKB1-207ENST00000508584 USP27XA6NNY8 438 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 FOXN3O00409 490 aaPredicted RBP17.26■□□□□ 0.35
NFKB1-207ENST00000508584 RECQL4O94761 1208 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 PNMA6AP0CW24 399 aaPredicted RBP17.26■□□□□ 0.35
NFKB1-207ENST00000508584 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
NFKB1-207ENST00000508584 PRKCIP41743 596 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 MYL6P60660 151 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 SGSM1Q2NKQ1 1148 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 TRAF7Q6Q0C0 670 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 Q7L0L9 218 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 SMG8Q8ND04 991 aaKnown RBP17.26■□□□□ 0.35
NFKB1-207ENST00000508584 ELMO3Q96BJ8 720 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 PPP1R13BQ96KQ4 1090 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 OSBPL7Q9BZF2 842 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 DEF6Q9H4E7 631 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 APOBEC3GQ9HC16 384 aaKnown RBP17.26■□□□□ 0.35
NFKB1-207ENST00000508584 RRAGDQ9NQL2 400 aaPredicted RBP17.26■□□□□ 0.35
NFKB1-207ENST00000508584 PARP2Q9UGN5 583 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 PCDHB2Q9Y5E7 798 aa17.26■□□□□ 0.35
NFKB1-207ENST00000508584 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 TLR3O15455 904 aaKnown RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 AKR1B10O60218 316 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 CLSTN1O94985 981 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 ASS1P00966 412 aaKnown RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 CST3P01034 146 aaPredicted RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 CD4P01730 458 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 AKAP5P24588 427 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 KIF11P52732 1056 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 NOP14P78316 857 aaKnown RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 BFSP2Q13515 415 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 SPOPLQ6IQ16 392 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 ALKAL1Q6UXT8 129 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 HACE1Q8IYU2 909 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 ACRBPQ8NEB7 543 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 SHC3Q92529 594 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 TAF4BQ92750 862 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 TSPAN18Q96SJ8 248 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms