RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 C1orf127Q8N9H9 656 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 CXorf38Q8TB03 319 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 TSPAN18Q96SJ8 248 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 TRIM5Q9C035 493 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 PRO3102Q9H379 93 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 RC3H2Q9HBD1 1191 aaKnown RBP15.33■□□□□ 0.04
RNF4-208ENST00000507247 GOLGA2P5Q9HBQ8 144 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 CACNG4Q9UBN1 327 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 SIX4Q9UIU6 781 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 UBQLN1Q9UMX0 589 aaKnown RBP15.33■□□□□ 0.04
RNF4-208ENST00000507247 GBF1Q92538 1859 aa15.33■□□□□ 0.04
RNF4-208ENST00000507247 PMM2O15305 246 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 HOXA2O43364 376 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 B4GALT3O60512 393 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 N4BP1O75113 896 aaKnown RBP15.32■□□□□ 0.04
RNF4-208ENST00000507247 DGKIO75912 1065 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 TNNC2P02585 160 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 THP07101 528 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 AP3M2P53677 418 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 UBXN1Q04323 297 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 KCNMA1Q12791 1236 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 BIRC3Q13489 604 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 FILIP1LQ4L180 1135 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 EPC2Q52LR7 807 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 RASIP1Q5U651 963 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 FAM117BQ6P1L5 589 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 BEST2Q8NFU1 509 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 CACTINQ8WUQ7 758 aaKnown RBP15.32■□□□□ 0.04
RNF4-208ENST00000507247 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 TBC1D13Q9NVG8 400 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
RNF4-208ENST00000507247 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 HCSTQ9UBK5 93 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 COQ4Q9Y3A0 265 aa15.32■□□□□ 0.04
RNF4-208ENST00000507247 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 PPEF2O14830 753 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 P4HA2O15460 535 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 CBFA2T2O43439 604 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 DDHD2O94830 711 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 CST3P01034 146 aaPredicted RBP15.31■□□□□ 0.04
RNF4-208ENST00000507247 HLA-DRAP01903 254 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ITGB3P05106 788 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 CYP3A5P20815 502 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 PBX1P40424 430 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 KLK7P49862 253 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 MRE11P49959 708 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ZNF75DP51815 510 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 PAN2Q504Q3 1202 aaKnown RBP15.31■□□□□ 0.04
RNF4-208ENST00000507247 FKBP15Q5T1M5 1219 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ZNF280BQ86YH2 543 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ABI1Q8IZP0 508 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 LMO3Q8TAP4 145 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ELMO3Q96BJ8 720 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
RNF4-208ENST00000507247 ERGIC2Q96RQ1 377 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 GDF15Q99988 308 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 SLC38A7Q9NVC3 462 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
RNF4-208ENST00000507247 ANO9A1A5B4 782 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
RNF4-208ENST00000507247 XPOTO43592 962 aaKnown RBP15.3■□□□□ 0.04
RNF4-208ENST00000507247 PHACTR2O75167 634 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 SLC9A1P19634 815 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 LRPAP1P30533 357 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 POLR2BP30876 1174 aaKnown RBP15.3■□□□□ 0.04
RNF4-208ENST00000507247 PIK3CAP42336 1068 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 APBA1Q02410 837 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 DSC1Q08554 894 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 NCOA4Q13772 614 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 SYCP1Q15431 976 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 SHHQ15465 462 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 GBP6Q6ZN66 633 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 FBXL13Q8NEE6 735 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 SLC9A7Q96T83 725 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 PAAF1Q9BRP4 392 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 PI4K2AQ9BTU6 479 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 GCNT4Q9P109 453 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 KANSL3Q9P2N6 904 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 ITGA11Q9UKX5 1188 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 SLC4A7Q9Y6M7 1214 aa15.3■□□□□ 0.04
RNF4-208ENST00000507247 CASTOR2A6NHX0 329 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 GJB5O95377 273 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 ADCY5O95622 1261 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 KRT19P08727 400 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 IGFBP6P24592 240 aaPredicted RBP15.29■□□□□ 0.04
RNF4-208ENST00000507247 PON1P27169 355 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 MYL6P60660 151 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 TUSC3Q13454 348 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 C9orf57Q5W0N0 161 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 DPY19L2P1Q6NXN4 242 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 COLGALT2Q8IYK4 626 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 EHBP1Q8NDI1 1231 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 INTS2Q9H0H0 1204 aaKnown RBP15.29■□□□□ 0.04
RNF4-208ENST00000507247 XYLT2Q9H1B5 865 aa15.29■□□□□ 0.04
RNF4-208ENST00000507247 MTIF3Q9H2K0 278 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms