RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RASSF8Q8NHQ8 419 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 SMG7Q92540 1137 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 C18orf25Q96B23 403 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 PRKD2Q9BZL6 878 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 PLEKHA5Q9HAU0 1116 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 SLC24A3Q9HC58 644 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 BACE2Q9Y5Z0 518 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 MYH15Q9Y2K3 1946 aa9.91□□□□□ -0.82
PDLIM5-209ENST00000506632 A0A087X0B3 334 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 A0A0B4J269 797 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 MYMKA6NI61 221 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 HNRNPDLO14979 420 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 OGTO15294 1046 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 TRAPPC3O43617 180 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 TBC1D4O60343 1298 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 TBCAO75347 108 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 PPP1R37O75864 691 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 POU2F2P09086 479 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 CLTAP09496 248 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 CXCL8P10145 99 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 TKTP29401 623 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 NMT1P30419 496 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 LRPAP1P30533 357 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 HOXA9P31269 272 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 ABCD1P33897 745 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 PLA2G5P39877 138 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 TNFSF9P41273 254 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 LIG4P49917 911 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 CEBPZQ03701 1054 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 MTMR3Q13615 1198 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 MRPL58Q14197 206 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 ZBTB6Q15916 424 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 KYAT1Q16773 422 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 RSPO2Q6UXX9 243 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 ANKS3Q6ZW76 656 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 UBALD2Q8IYN6 164 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 LINC00301Q8NCQ3 95 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 DNAJC19Q96DA6 116 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 BICD1Q96G01 975 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 SUSD3Q96L08 255 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 MFSD14AQ96MC6 490 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 STRA6Q9BX79 667 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 KCNH6Q9H252 994 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 CCDC39Q9UFE4 941 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 STYXL1Q9Y6J8 313 aa9.9□□□□□ -0.82
PDLIM5-209ENST00000506632 PIEZO1Q92508 2521 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 DOCK6Q96HP0 2047 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 I3L4J1 428 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 SYN3O14994 580 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 KRT18P05783 430 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ASGR2P07307 311 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 HNRNPA1P09651 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 MYBP10242 640 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 CYP3A5P20815 502 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 OR1D2P34982 312 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 TXLNAP40222 546 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ENOX2Q16206 610 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ZC2HC1CQ53FD0 456 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ZBTB41Q5SVQ8 909 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 RRAGBQ5VZM2 374 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 SLC8B1Q6J4K2 584 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 CCDC73Q6ZRK6 1079 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 RTL10Q7L3V2 364 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ZNF720Q7Z2F6 126 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 SFR1Q86XK3 245 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 TMEM130Q8N3G9 435 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 FBXL6Q8N531 539 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 DDX12PQ92771 950 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 STAMQ92783 540 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ACSF2Q96CM8 615 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 HVCN1Q96D96 273 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 TSPAN18Q96SJ8 248 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 ZHX3Q9H4I2 956 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 EPS15L1Q9UBC2 864 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 SEL1LQ9UBV2 794 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 TUBGCP4Q9UGJ1 667 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 CPSF3Q9UKF6 684 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 CDY1Q9Y6F8 540 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
PDLIM5-209ENST00000506632 CACNA1HO95180 2353 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 LACTBL1A8MY62 500 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 TISP43B9A030 160 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 ANKRD63C9JTQ0 380 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 PPP6R2O75170 966 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 ABLIM3O94929 683 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 YEATS4O95619 227 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 C8AP07357 584 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 AARSP49588 968 aaKnown RBP eCLIP9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 UVSSAQ2YD98 709 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 LIN9Q5TKA1 542 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 SV2BQ7L1I2 683 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 DYMQ7RTS9 669 aa9.88□□□□□ -0.83
PDLIM5-209ENST00000506632 KIF12Q96FN5 646 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms