RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 RIPOR3Q96MK2 946 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 NECTIN4Q96NY8 510 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
MED28-204ENST00000506409 IKZF4Q9H2S9 585 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 TUBGCP4Q9UGJ1 667 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 CPSF3Q9UKF6 684 aaKnown RBP16.92■□□□□ 0.3
MED28-204ENST00000506409 NUB1Q9Y5A7 615 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 STYXL1Q9Y6J8 313 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 LACTBL1A8MY62 500 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 LOC730098B7Z3J9 87 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 I3L4J1 428 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 FGFR3P22607 806 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 MTHFRP42898 656 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 BRCC3P46736 316 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 ACOT2P49753 483 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 ATAT1Q5SQI0 421 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 SYCP3Q8IZU3 236 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 POMGNT1Q8WZA1 660 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 FGFBP2Q9BYJ0 223 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 EPHX3Q9H6B9 360 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 AGO2Q9UKV8 859 aaKnown RBP16.91■□□□□ 0.3
MED28-204ENST00000506409 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
MED28-204ENST00000506409 UBQLN1Q9UMX0 589 aaKnown RBP16.91■□□□□ 0.3
MED28-204ENST00000506409 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.91■□□□□ 0.3
MED28-204ENST00000506409 PDCD11Q14690 1871 aaKnown RBP16.9■□□□□ 0.3
MED28-204ENST00000506409 TGM5O43548 720 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 XPOTO43592 962 aaKnown RBP16.9■□□□□ 0.3
MED28-204ENST00000506409 C1RP00736 705 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 SPATA31D3P0C874 917 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 TKTP29401 623 aaKnown RBP16.9■□□□□ 0.3
MED28-204ENST00000506409 ADSSP30520 456 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 POSTNQ15063 836 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 ZBTB6Q15916 424 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 CNNM4Q6P4Q7 775 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 SPATA31D4Q6ZUB0 917 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 STXBP4Q6ZWJ1 553 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 GPR149Q86SP6 731 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 CD302Q8IX05 232 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 TSPAN18Q96SJ8 248 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 CLSTN3Q9BQT9 956 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 POMKQ9H5K3 350 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 PLXNA3P51805 1871 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 VWA8A3KMH1 1905 aa16.9■□□□□ 0.3
MED28-204ENST00000506409 PI4K2BG5E9Z4 385 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 PRPF6O94906 941 aaKnown RBP16.89■□□□□ 0.29
MED28-204ENST00000506409 ADRB2P07550 413 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 CYP3A5P20815 502 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 SP100P23497 879 aaPredicted RBP16.89■□□□□ 0.29
MED28-204ENST00000506409 MCM4P33991 863 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 LILRA6Q6PI73 481 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 C15orf39Q6ZRI6 1047 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 ANKS3Q6ZW76 656 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 RNF135Q8IUD6 432 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 CEP57L1Q8IYX8 460 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 HPS3Q969F9 1004 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 C1QTNF1Q9BXJ1 281 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 SCAND2PQ9GZW5 306 aaPredicted RBP16.89■□□□□ 0.29
MED28-204ENST00000506409 PLEKHA4Q9H4M7 779 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 MTRRQ9UBK8 725 aa16.89■□□□□ 0.29
MED28-204ENST00000506409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
MED28-204ENST00000506409 CCDC195A0A1B0GUA6 201 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 SYN3O14994 580 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 ADAM12O43184 909 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 DCXO43602 365 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 RFPL2O75678 378 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 ALADP13716 330 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 CMA1P23946 247 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 LRPAP1P30533 357 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 AFMP43652 599 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 TMEM130Q8N3G9 435 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 KREMEN2Q8NCW0 462 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 CMASQ8NFW8 434 aaPredicted RBP16.88■□□□□ 0.29
MED28-204ENST00000506409 FEZF2Q8TBJ5 459 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 BLZF1Q9H2G9 400 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 ASB7Q9H672 318 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 NR2E1Q9Y466 385 aa16.88■□□□□ 0.29
MED28-204ENST00000506409 A0A1B0GVL5 298 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 NFICP08651 508 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 SLFN14P0C7P3 912 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 PFKFB1P16118 471 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 GARTP22102 1010 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 CASP1P29466 404 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 OR1D2P34982 312 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 GUCY2FP51841 1108 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 POU5F1Q01860 360 aaKnown RBP16.87■□□□□ 0.29
MED28-204ENST00000506409 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
MED28-204ENST00000506409 SPATA1Q5VX52 437 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
MED28-204ENST00000506409 SAAL1Q96ER3 474 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms