RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 TCEAL4Q96EI5 215 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 DDX27Q96GQ7 796 aaKnown RBP9.06□□□□□ -0.96
SNF8-204ENST00000506104 ZNF512Q96ME7 567 aaPredicted RBP9.06□□□□□ -0.96
SNF8-204ENST00000506104 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 NELL2Q99435 816 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 TRMT61BQ9BVS5 477 aaKnown RBP9.06□□□□□ -0.96
SNF8-204ENST00000506104 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 KCNH3Q9ULD8 1083 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 PCDHGA2Q9Y5H1 932 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 USP34Q70CQ2 3546 aa9.06□□□□□ -0.96
SNF8-204ENST00000506104 ANK1P16157 1881 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ZMYM2Q9UBW7 1377 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 H7C4K7 107 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 PODXLO00592 558 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ZNF197O14709 1029 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ECI2O75521 394 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 EDN1P05305 212 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 OR52Z1P0C646 297 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 SPATA31C1P0DKV0 1188 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 XRCC6P12956 609 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNF8-204ENST00000506104 FDPSP14324 419 aaKnown RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 CYP11B2P19099 503 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 SDHBP21912 280 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 MAGEA9P43362 315 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 KPNA1P52294 538 aaPredicted RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 EFNA5P52803 228 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ATXN1P54253 815 aaKnown RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 PEX3P56589 373 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ROR1Q01973 937 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 LMNB2Q03252 620 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 TWF1Q12792 350 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ME3Q16798 604 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 FAM187BQ17R55 369 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ZNF528Q3MIS6 628 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 FAM78AQ5JUQ0 283 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 NT5DC1Q5TFE4 455 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 C3orf58Q8NDZ4 430 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 TNFRSF25Q93038 417 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 UROC1Q96N76 676 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 MTMR9Q96QG7 549 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 BHMT2Q9H2M3 363 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 LMAN1LQ9HAT1 526 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 TOPORSQ9NS56 1045 aaPredicted RBP9.05□□□□□ -0.96
SNF8-204ENST00000506104 GDE1Q9NZC3 331 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 ANKFY1Q9P2R3 1169 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 SSUH2Q9Y2M2 353 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 PIAS3Q9Y6X2 628 aa9.05□□□□□ -0.96
SNF8-204ENST00000506104 TCHHQ07283 1943 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 SMIM28A0A1B0GU29 152 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 WDR27A2RRH5 827 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 MAN2B1O00754 1011 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 ZNF263O14978 683 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 ABCB7O75027 752 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 KRT37O76014 449 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 SEC24AO95486 1093 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 CCNE1P24864 410 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 VIPR2P41587 438 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 CDR1P51861 262 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 NEK4P51957 841 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 UPP1Q16831 310 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 SEZ6Q53EL9 994 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 TTC38Q5R3I4 469 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 HAUS3Q68CZ6 603 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 CEP68Q76N32 757 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 NSUN7Q8NE18 718 aaKnown RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 ZNF461Q8TAF7 563 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 SNX29Q8TEQ0 813 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 IRF7Q92985 503 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 GTF3C6Q969F1 213 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 C18orf25Q96B23 403 aaPredicted RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 ELSPBP1Q96BH3 223 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 BICD1Q96G01 975 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 C8orf76Q96K31 380 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 ACAP3Q96P50 834 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 PGLYRP2Q96PD5 576 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 PPP1R10Q96QC0 940 aaKnown RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 POLR3CQ9BUI4 534 aaPredicted RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 DDX23Q9BUQ8 820 aaKnown RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 TARS2Q9BW92 718 aaKnown RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 OSBPL6Q9BZF3 934 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 CCDC113Q9H0I3 377 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 KMT5AQ9NQR1 393 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 DDX19AQ9NUU7 478 aaKnown RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 SLC38A7Q9NVC3 462 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 DLL3Q9NYJ7 618 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 LRWD1Q9UFC0 647 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 FBXL5Q9UKA1 691 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 INSL5Q9Y5Q6 135 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 BACE2Q9Y5Z0 518 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.04□□□□□ -0.96
SNF8-204ENST00000506104 OTOGLQ3ZCN5 2332 aa9.04□□□□□ -0.96
SNF8-204ENST00000506104 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.03□□□□□ -0.96
SNF8-204ENST00000506104 SLC38A8A6NNN8 435 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms