RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 ALKAL1Q6UXT8 129 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 ZPBP2Q6X784 338 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 DDX53Q86TM3 631 aaKnown RBP9.9□□□□□ -0.82
PTPN20-215ENST00000505814 RNF169Q8NCN4 708 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 SMRP1Q8NCR6 262 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 DEPTORQ8TB45 409 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 PPM1EQ8WY54 764 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 LARP4BQ92615 738 aaKnown RBP9.9□□□□□ -0.82
PTPN20-215ENST00000505814 IFT74Q96LB3 600 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 CLIC6Q96NY7 704 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 PPP1R10Q96QC0 940 aaKnown RBP9.9□□□□□ -0.82
PTPN20-215ENST00000505814 GAD1Q99259 594 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 CDCA3Q99618 268 aaPredicted RBP9.9□□□□□ -0.82
PTPN20-215ENST00000505814 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 POLD4Q9HCU8 107 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 NGRNQ9NPE2 291 aaKnown RBP9.9□□□□□ -0.82
PTPN20-215ENST00000505814 KANSL3Q9P2N6 904 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 USP20Q9Y2K6 914 aa9.9□□□□□ -0.82
PTPN20-215ENST00000505814 RBM19Q9Y4C8 960 aaKnown RBP9.9□□□□□ -0.82
PTPN20-215ENST00000505814 ANK1P16157 1881 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 PLXNA3P51805 1871 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 TSC2P49815 1807 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 C2orf71A6NGG8 1288 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 HIDE1A8MVS5 230 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 TMEM189-UBE2V1I3L0A0 370 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 NRP1O14786 923 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 ZC3H11AO75152 810 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTPN20-215ENST00000505814 RECQL4O94761 1208 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 C1RP00736 705 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 MARCKSP29966 332 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-215ENST00000505814 RNF144AP50876 292 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-215ENST00000505814 MCL1Q07820 350 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
PTPN20-215ENST00000505814 PTPN14Q15678 1187 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 AAK1Q2M2I8 961 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 ATF7IP2Q5U623 682 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 ATL3Q6DD88 541 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 SLC39A4Q6P5W5 647 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 CD300LGQ6UXG3 332 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 GPBP1Q86WP2 473 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 THNSL1Q8IYQ7 743 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 CEP120Q8N960 986 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 MRPL43Q8N983 215 aaKnown RBP9.89□□□□□ -0.83
PTPN20-215ENST00000505814 URGCPQ8TCY9 931 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 SUSD6Q92537 303 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 LRFN3Q9BTN0 628 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 HERC2P3Q9BVR0 1158 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 CHST7Q9NS84 486 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 STK39Q9UEW8 545 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 CITO14578 2027 aa9.89□□□□□ -0.83
PTPN20-215ENST00000505814 FAM237AA0A1B0GTK4 181 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 NT5C1B-RDH14C9J2C7 533 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 F8W810 466 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 TOM1L1O75674 476 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 MCF2P10911 925 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 KCNE1P15382 129 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 AKAP5P24588 427 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 GTF2BQ00403 316 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 EHHADHQ08426 723 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
PTPN20-215ENST00000505814 MCM6Q14566 821 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 SMAD2Q15796 467 aaKnown RBP9.88□□□□□ -0.83
PTPN20-215ENST00000505814 LONRF3Q496Y0 759 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 SHC4Q6S5L8 630 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 SLC22A17Q8WUG5 538 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 PLIN2Q99541 437 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 TCF25Q9BQ70 676 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 TARS2Q9BW92 718 aaKnown RBP9.88□□□□□ -0.83
PTPN20-215ENST00000505814 MRPL4Q9BYD3 311 aaKnown RBP9.88□□□□□ -0.83
PTPN20-215ENST00000505814 RXFP1Q9HBX9 757 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 KMT5AQ9NQR1 393 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 OLFML3Q9NRN5 406 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 KBTBD4Q9NVX7 518 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 CNTN3Q9P232 1028 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 KCNG1Q9UIX4 513 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 INPP5FQ9Y2H2 1132 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 STYXL1Q9Y6J8 313 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 TRIP11Q15643 1979 aa9.88□□□□□ -0.83
PTPN20-215ENST00000505814 MYMKA6NI61 221 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 SFI1A8K8P3 1242 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 K7ERI5 159 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 SPTLC2O15270 562 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 SLC16A4O15374 487 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 MBTPS2O43462 519 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 POMCP01189 267 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 SOD2P04179 222 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 IL9P15248 144 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 KCNA5P22460 613 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 NRIP1P48552 1158 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 ALDH7A1P49419 539 aaKnown RBP9.87□□□□□ -0.83
PTPN20-215ENST00000505814 MRE11P49959 708 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
PTPN20-215ENST00000505814 DSG1Q02413 1049 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 TUSC3Q13454 348 aa9.87□□□□□ -0.83
PTPN20-215ENST00000505814 SMAD4Q13485 552 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms