RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 FSCN1Q16658 493 aaKnown RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 SGSM1Q2NKQ1 1148 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 DCAF4L1Q3SXM0 396 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 LMBRD2Q68DH5 695 aaPredicted RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 CHRDL2Q6WN34 429 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 ZNF677Q86XU0 584 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 NT5DC4Q86YG4 428 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 GLYCTKQ8IVS8 523 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 RPUSD2Q8IZ73 545 aaKnown RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 SLAIN1Q8ND83 568 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 TRPV1Q8NER1 839 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 OR5B17Q8NGF7 314 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 UBXN4Q92575 508 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 TAF4BQ92750 862 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 ANKRD36BP1Q96IX9 119 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 ZNF668Q96K58 619 aaPredicted RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 RPGRIP1Q96KN7 1286 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 SCLT1Q96NL6 688 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 PI4K2AQ9BTU6 479 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 PACSIN1Q9BY11 444 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 IMPG2Q9BZV3 1241 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 UPF3AQ9H1J1 476 aaKnown RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 ISCUQ9H1K1 167 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 PDZD7Q9H5P4 517 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 SPC25Q9HBM1 224 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 SALL4Q9UJQ4 1053 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 NOCTQ9UK39 431 aaKnown RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 CNTN6Q9UQ52 1028 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 PCDHGC5Q9Y5F6 944 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 CAPN6Q9Y6Q1 641 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 ANK1P16157 1881 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 LAMA2P24043 3122 aaKnown RBP8.65□□□□□ -1.02
COL4A5-208ENST00000505728 FRMPD3Q5JV73 1810 aa8.65□□□□□ -1.02
COL4A5-208ENST00000505728 NCANO14594 1321 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PTPRJQ12913 1337 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 A0A0C4DFX4 3053 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CTAGE15A4D2H0 777 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 LACTBL1A8MY62 500 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 BUB1O43683 1085 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 GPR32O75388 356 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PALMO75781 387 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 INHAP05111 366 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 TMEM191BP0C7N4 346 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CTAGE8P0CG41 777 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 STAG3L1P0CL83 205 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CYP11B1P15538 503 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CHRNB2P17787 502 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 HOXC8P31273 242 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 NOP2P46087 812 aaKnown RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PDE6CP51160 858 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PURAQ00577 322 aaKnown RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 BEX3Q00994 111 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CDR2Q01850 454 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 TRPC3Q13507 836 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CUL2Q13617 745 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 SEZ6Q53EL9 994 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PPP1R2P3Q6NXS1 205 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 RSRC2Q7L4I2 434 aaKnown RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CTAGE6Q86UF2 777 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CTAGE4Q8IX94 777 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 SYCE1Q8N0S2 351 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 CTNNBL1Q8WYA6 563 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 TRIB2Q92519 343 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 ANKRD7Q92527 254 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 DPF3Q92784 378 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 GOLGA1Q92805 767 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 FAM212AQ96EL1 285 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 ACAP3Q96P50 834 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 MTG1Q9BT17 334 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PRO3102Q9H379 93 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PLEKHA5Q9HAU0 1116 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 SEPT11Q9NVA2 429 aaKnown RBP8.64□□□□□ -1.03
COL4A5-208ENST00000505728 RNF14Q9UBS8 474 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 SNX12Q9UMY4 172 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 HYOU1Q9Y4L1 999 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 TRIP11Q15643 1979 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 SCN10AQ9Y5Y9 1956 aa8.64□□□□□ -1.03
COL4A5-208ENST00000505728 ENC1O14682 589 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 SEPT4O43236 478 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TSPAN1O60635 241 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 CST3P01034 146 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 FTLP02792 175 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 RPLP2P05387 115 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 KRT5P13647 590 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 DARSP14868 501 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 ACO1P21399 889 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 GRM5P41594 1212 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 HADHBP55084 474 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 CHMP4BP1P59074 171 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 YWHAEP62258 255 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 NOP14P78316 857 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 GPC5P78333 572 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 TFAMQ00059 246 aaKnown RBP8.63□□□□□ -1.03
COL4A5-208ENST00000505728 FMO1Q01740 532 aa8.63□□□□□ -1.03
COL4A5-208ENST00000505728 ITIH3Q06033 890 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms