RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 DNASE1L2Q92874 299 aa13.25□□□□□ -0.29
COL25A1-205ENST00000505377 PRIMPOLQ96LW4 560 aa13.25□□□□□ -0.29
COL25A1-205ENST00000505377 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
COL25A1-205ENST00000505377 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
COL25A1-205ENST00000505377 FAM126AQ9BYI3 521 aaPredicted RBP13.25□□□□□ -0.29
COL25A1-205ENST00000505377 CCDC113Q9H0I3 377 aa13.25□□□□□ -0.29
COL25A1-205ENST00000505377 AVENQ9NQS1 362 aaPredicted RBP13.25□□□□□ -0.29
COL25A1-205ENST00000505377 RALGAPA1Q6GYQ0 2036 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ARHGEF37A1IGU5 675 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 MED24O75448 989 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ABLIM3O94929 683 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ATP2B1P20020 1258 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 KCNA4P22459 653 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 CALCRLQ16602 461 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 UPP1Q16831 310 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 LAIR1Q6GTX8 287 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 TMEM130Q8N3G9 435 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 CELF5Q8N6W0 485 aaKnown RBP13.24□□□□□ -0.29
COL25A1-205ENST00000505377 CEP120Q8N960 986 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ZNF461Q8TAF7 563 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 FAM3CQ92520 227 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 RSPRY1Q96DX4 576 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ASB16Q96NS5 453 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 NAP1L4Q99733 375 aaKnown RBP13.24□□□□□ -0.29
COL25A1-205ENST00000505377 TMEM60Q9H2L4 133 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ZFP14Q9HCL3 533 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ZNF334Q9HCZ1 680 aaPredicted RBP13.24□□□□□ -0.29
COL25A1-205ENST00000505377 SEMA4GQ9NTN9 838 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
COL25A1-205ENST00000505377 RAB23Q9ULC3 237 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 ATRXP46100 2492 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 COL4A2P08572 1712 aa13.24□□□□□ -0.29
COL25A1-205ENST00000505377 TICRRQ7Z2Z1 1910 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 SMIM28A0A1B0GU29 152 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 ACKR2O00590 384 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 MAN2B1O00754 1011 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 PRRG1O14668 218 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 LRG1P02750 347 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 RETP07949 1114 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 CHRNB1P11230 501 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
COL25A1-205ENST00000505377 CCNE1P24864 410 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 SOX9P48436 509 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 FOSBP53539 338 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 SIM2Q14190 667 aaPredicted RBP13.23□□□□□ -0.29
COL25A1-205ENST00000505377 MAPK6Q16659 721 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 HEATR6Q6AI08 1181 aaKnown RBP13.23□□□□□ -0.29
COL25A1-205ENST00000505377 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 ANKS3Q6ZW76 656 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 CATSPER3Q86XQ3 398 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 CHAMP1Q96JM3 812 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 MTMR9Q96QG7 549 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 CEP72Q9P209 647 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 TPCN1Q9ULQ1 816 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 ZFYVE26Q68DK2 2539 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 FRYQ5TBA9 3013 aa13.23□□□□□ -0.29
COL25A1-205ENST00000505377 STK36Q9NRP7 1315 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 BAHCC1Q9P281 2608 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL25A1-205ENST00000505377 CXCL12P48061 93 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
COL25A1-205ENST00000505377 OSTNP61366 133 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 PRR23CQ6ZRP0 262 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 Q6ZS52 159 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-205ENST00000505377 RTL10Q7L3V2 364 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 SMARCD2Q92925 531 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 ZMAT2Q96NC0 199 aaKnown RBP13.22□□□□□ -0.29
COL25A1-205ENST00000505377 ORC3Q9UBD5 711 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-205ENST00000505377 FBXL5Q9UKA1 691 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 INSL5Q9Y5Q6 135 aa13.22□□□□□ -0.29
COL25A1-205ENST00000505377 BTBD18B2RXH4 712 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 K7ESF4 209 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 ARNTLO00327 626 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-205ENST00000505377 PFKFB2O60825 505 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 MYL4P12829 197 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 ATF2P15336 505 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 PSMC3P17980 439 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 CYP11B2P19099 503 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 ELF1P32519 619 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 KRT2P35908 639 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 CCR3P51677 355 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 NRLP54845 237 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 TEAD2Q15562 447 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 CCDC6Q16204 474 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 CSRP2Q16527 193 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 TXNDC11Q6PKC3 985 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 PDZD4Q76G19 769 aaPredicted RBP13.21□□□□□ -0.29
COL25A1-205ENST00000505377 TCEAL8Q8IYN2 117 aa13.21□□□□□ -0.29
COL25A1-205ENST00000505377 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms