RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 ZBED3Q96IU2 234 aaPredicted RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 KIAA1586Q9HCI6 787 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 KCNK9Q9NPC2 374 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 STXBP5LQ9Y2K9 1186 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 FAM187AA6NFU0 413 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 CHRNB2P17787 502 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 GARTP22102 1010 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 KCNV1Q6PIU1 500 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 CAPN12Q6ZSI9 719 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 MICALCLQ6ZW33 695 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 SLC13A5Q86YT5 568 aaPredicted RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 SAMD3Q8N6K7 520 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 KLRG1Q96E93 195 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 TRIM7Q9C029 511 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 IRAK4Q9NWZ3 460 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 UVRAGQ9P2Y5 699 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 PARP2Q9UGN5 583 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 GOLGA6L7A0A1B0GV03 622 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 PI4K2BG5E9Z4 385 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 CHUKO15111 745 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 GJB6O95452 261 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 IFNB1P01574 187 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 TCF7P36402 384 aaPredicted RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 IFNAR2P48551 515 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 NOP14P78316 857 aaKnown RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 ADCY1Q08828 1119 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 FSTL1Q12841 308 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 DHX34Q14147 1143 aaKnown RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 KCTD2Q14681 263 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 LY6KQ17RY6 165 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 HAUS1Q96CS2 278 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 STRA6Q9BX79 667 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 PCDHB2Q9Y5E7 798 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 TCRBV7S2A1N4TA0A589 114 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 A6NNZ2 444 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 DDNO94850 711 aaPredicted RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 LDHAP00338 332 aaKnown RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 LSP1P33241 339 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 GPC3P51654 580 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 NCOA4Q13772 614 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 TUBB8Q3ZCM7 444 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 ZBTB41Q5SVQ8 909 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 TREML2Q5T2D2 321 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 SLC39A4Q6P5W5 647 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 RASGEF1CQ8N431 466 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 CEP120Q8N960 986 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 RBBP8NLQ8NC74 664 aaPredicted RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 COL4A5P29400 1685 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 PODXLO00592 558 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 TLR3O15455 904 aaKnown RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 SP2Q02086 613 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 VGLL4Q14135 290 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
CSF1R-203ENST00000504875 C11orf63Q6NUN7 778 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 B4GALNT4Q76KP1 1039 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 ENOSF1Q7L5Y1 443 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 TMC3Q7Z5M5 1100 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 CD2APQ9Y5K6 639 aa10.37□□□□□ -0.75
CSF1R-203ENST00000504875 ADM5C9JUS6 153 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 RGS20O76081 388 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 CPP00450 1065 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 VIMP08670 466 aaKnown RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 ATF2P15336 505 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 GLRA2P23416 452 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 KRT17Q04695 432 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 ZNF844Q08AG5 666 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 MAPK6Q16659 721 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 CCDC38Q502W7 563 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 ABHD15Q6UXT9 468 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 PRPF31Q8WWY3 499 aaKnown RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 PSPC1Q8WXF1 523 aaKnown RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 SEPT1Q8WYJ6 367 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 TRIM11Q96F44 468 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 ST6GALNAC4Q9H4F1 302 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 TMBIM4Q9HC24 238 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 PGAP2Q9UHJ9 254 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 TMEM59LQ9UK28 342 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 NOCTQ9UK39 431 aaKnown RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 AGTPBP1Q9UPW5 1226 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 RPS6KA5O75582 802 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 RARAP10276 462 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 UBA1P22314 1058 aaKnown RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 COILP38432 576 aaPredicted RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 MDH1P40925 334 aaKnown RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 ALDH5A1P51649 535 aaPredicted RBP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 MAP3K10Q02779 954 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 IFT88Q13099 833 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 CLEC16AQ2KHT3 1053 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 PRELID2Q8N945 189 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 CHST13Q8NET6 341 aa10.36□□□□□ -0.75
CSF1R-203ENST00000504875 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSF1R-203ENST00000504875 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms