RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 ALDH1B1P30837 517 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SOX5P35711 763 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 STAT1P42224 750 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 MNAT1P51948 309 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 DLG4P78352 724 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 MAP3K10Q02779 954 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ICA1Q05084 483 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CUL1Q13616 776 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 KRT71Q3SY84 523 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 Q4G0T1 1027 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ZNF746Q6NUN9 644 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SP8Q8IXZ3 490 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ZDHHC14Q8IZN3 488 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 NLGN2Q8NFZ4 835 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ERMNQ8TAM6 284 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 KRT35Q92764 455 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 AMNQ9BXJ7 453 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 COA1Q9GZY4 146 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PCIF1Q9H4Z3 704 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 LIN7BQ9HAP6 207 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SNX24Q9Y343 169 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SLX4Q8IY92 1834 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TLDC2A0PJX2 215 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 H0YIN7 160 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 EYA4O95677 639 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 MAPTP10636 758 aaKnown RBP7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SREBF1P36956 1147 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ECE1P42892 770 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 FMO5P49326 533 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PPATQ06203 517 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 IFI16Q16666 785 aaKnown RBP7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 STYK1Q6J9G0 422 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 C6orf89Q6UWU4 347 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 LRIG3Q6UXM1 1119 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 C1orf186Q6ZWK4 172 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CNPY4Q8N129 248 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PRPF38AQ8NAV1 312 aaKnown RBP7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 KAT5Q92993 513 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TEKT1Q969V4 418 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 MKL1Q969V6 931 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 LRRC45Q96CN5 670 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 HOOK2Q96ED9 719 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 BTBD6Q96KE9 485 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 FIZ1Q96SL8 496 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SYT17Q9BSW7 474 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 EPB41L4BQ9H329 900 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PNMA2Q9UL42 364 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PCDHGC4Q9Y5F7 938 aa7.08□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 IGLV3-22A0A075B6J6 115 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TCRBV7S2A1N4TA0A589 114 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 METTL12A8MUP2 240 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TRAPPC3O43617 180 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CFBP00751 764 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 GH2P01242 217 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 FERP16591 822 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 RPL13P26373 211 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 HOXA7P31268 230 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PLTPP55058 493 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PPP2R2AP63151 447 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 IFI35P80217 286 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 UBAP2LQ14157 1087 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 BMT2Q1RMZ1 405 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 NBPF9Q3BBW0 867 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SYDE2Q5VT97 1194 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CCDC174Q6PII3 467 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 OTOP1Q7RTM1 612 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SUGP1Q8IWZ8 645 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CCDC13Q8IYE1 715 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 DCAF4Q8WV16 495 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 C18orf8Q96DM3 657 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 NSUN5Q96P11 429 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TCF12Q99081 682 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 OSMRQ99650 979 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 HSD17B14Q9BPX1 270 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 SYT11Q9BT88 431 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 INTS2Q9H0H0 1204 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 METTL14Q9HCE5 456 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 UTP11Q9Y3A2 253 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 FOXO6A8MYZ6 492 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 DDX39AO00148 427 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 FSBPO95073 299 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CALCAP01258 141 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ARP10275 920 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TNFAIP3P21580 790 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CHRNA5P30532 468 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 PSMC2P35998 433 aaKnown RBP7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 TNP2Q05952 138 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 AP3B2Q13367 1082 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 MCTP2Q6DN12 878 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 FIGNL1Q6PIW4 674 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ZNF720Q7Z2F6 126 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 VPS36Q86VN1 386 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ARHGEF19Q8IW93 802 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 CCDC26Q8TAB7 109 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 LMBR1Q8WVP7 490 aa7.07□□□□□ -1.28
NPHP3-AS1-202ENST00000504440 ZNF622Q969S3 477 aaKnown RBP eCLIP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms