RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 KCNK18Q7Z418 384 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 TMX3Q96JJ7 454 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 LMNAP02545 664 aaKnown RBP23.52■■□□□ 1.36
RNF4-205ENST00000504224 PFKPQ01813 784 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 STRN3Q13033 797 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 MAPK7Q13164 816 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 UBXN2BQ14CS0 331 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 C1orf186Q6ZWK4 172 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 ZNF461Q8TAF7 563 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 C18orf25Q96B23 403 aaPredicted RBP23.52■■□□□ 1.36
RNF4-205ENST00000504224 SEMA4AQ9H3S1 761 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 C17orf75Q9HAS0 396 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 ANKFY1Q9P2R3 1169 aa23.52■■□□□ 1.36
RNF4-205ENST00000504224 KANSL1LA0AUZ9 987 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 H7C4K7 107 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 SP9P0CG40 484 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 GLULP15104 373 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 KCNE1P15382 129 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 PRPHP41219 470 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 SLC8B1Q6J4K2 584 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 ZC3H14Q6PJT7 736 aaKnown RBP23.51■■□□□ 1.35
RNF4-205ENST00000504224 ZBTB45Q96K62 511 aaPredicted RBP23.51■■□□□ 1.35
RNF4-205ENST00000504224 PLIN2Q99541 437 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 MMTAG2Q9BU76 263 aaKnown RBP23.51■■□□□ 1.35
RNF4-205ENST00000504224 CYP4F11Q9HBI6 524 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.51■■□□□ 1.35
RNF4-205ENST00000504224 CNTN3Q9P232 1028 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 VPS13AQ96RL7 3174 aa23.51■■□□□ 1.35
RNF4-205ENST00000504224 WDR27A2RRH5 827 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 SYN3O14994 580 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 PTPN2P17706 415 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 PROZP22891 400 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 RPL9P32969 192 aaKnown RBP23.5■■□□□ 1.35
RNF4-205ENST00000504224 MCM4P33991 863 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 MATR3P43243 847 aaKnown RBP eCLIP23.5■■□□□ 1.35
RNF4-205ENST00000504224 PRKCQQ04759 706 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 SLC5A9Q2M3M2 681 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 SEZ6Q53EL9 994 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 CORO1BQ9BR76 489 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 TIPINQ9BVW5 301 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 BCO2Q9BYV7 579 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 GDE1Q9NZC3 331 aa23.5■■□□□ 1.35
RNF4-205ENST00000504224 RIF1Q5UIP0 2472 aaKnown RBP23.5■■□□□ 1.35
RNF4-205ENST00000504224 MYH15Q9Y2K3 1946 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 ABLIM1O14639 778 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 CEBPBP17676 345 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 CD72P21854 359 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 GUCY2CP25092 1073 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 SMTNP53814 917 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 NOLC1Q14978 699 aaKnown RBP eCLIP23.49■■□□□ 1.35
RNF4-205ENST00000504224 CTXN3Q4LDR2 81 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 CDK5RAP3Q96JB5 506 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 HINFPQ9BQA5 517 aa23.49■■□□□ 1.35
RNF4-205ENST00000504224 SPATA6Q9NWH7 488 aaPredicted RBP23.49■■□□□ 1.35
RNF4-205ENST00000504224 FAM186AA6NE01 2351 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 ARHGEF37A1IGU5 675 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 FAM170BA6NMN3 283 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 TOM1L1O75674 476 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 ABLIM3O94929 683 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 CD2BP2O95400 341 aaKnown RBP23.48■■□□□ 1.35
RNF4-205ENST00000504224 PLS3P13797 630 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 ATF2P15336 505 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 ID4P47928 161 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 SPIRE2Q8WWL2 714 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 FBXL5Q9UKA1 691 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 MTF2Q9Y483 593 aaPredicted RBP23.48■■□□□ 1.35
RNF4-205ENST00000504224 TRIP11Q15643 1979 aa23.48■■□□□ 1.35
RNF4-205ENST00000504224 DMDP11532 3685 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 H3BQV1 296 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 ECI2O75521 394 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 SEC24AO95486 1093 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 GJB2P29033 226 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 RILPL1Q5EBL4 403 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 ZNF280DQ6N043 979 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 TPRG1Q6ZUI0 275 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 TCEAL8Q8IYN2 117 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 ELMOD1Q8N336 334 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 TMEM161BQ8NDZ6 487 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 APPL2Q8NEU8 664 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 BICD1Q96G01 975 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 SUSD3Q96L08 255 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 NTPCRQ9BSD7 190 aaKnown RBP23.47■■□□□ 1.35
RNF4-205ENST00000504224 DDX23Q9BUQ8 820 aaKnown RBP23.47■■□□□ 1.35
RNF4-205ENST00000504224 PLA2G2FQ9BZM2 168 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 AVENQ9NQS1 362 aaPredicted RBP23.47■■□□□ 1.35
RNF4-205ENST00000504224 KCNG1Q9UIX4 513 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 SMC3Q9UQE7 1217 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.47■■□□□ 1.35
RNF4-205ENST00000504224 INSL5Q9Y5Q6 135 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 COL4A3Q01955 1670 aa23.47■■□□□ 1.35
RNF4-205ENST00000504224 VWA3AA6NCI4 1184 aa23.46■■□□□ 1.35
RNF4-205ENST00000504224 CLDN3O15551 220 aa23.46■■□□□ 1.35
RNF4-205ENST00000504224 MEFVO15553 781 aaPredicted RBP23.46■■□□□ 1.35
RNF4-205ENST00000504224 LAMTOR5O43504 91 aa23.46■■□□□ 1.35
RNF4-205ENST00000504224 TBC1D4O60343 1298 aa23.46■■□□□ 1.35
RNF4-205ENST00000504224 MAPTP10636 758 aaKnown RBP23.46■■□□□ 1.35
RNF4-205ENST00000504224 MARCKSP29966 332 aaPredicted RBP23.46■■□□□ 1.35
RNF4-205ENST00000504224 ATP2C1P98194 919 aaPredicted RBP23.46■■□□□ 1.35
RNF4-205ENST00000504224 FOXK2Q01167 660 aa23.46■■□□□ 1.35
RNF4-205ENST00000504224 SLC10A6Q3KNW5 377 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms