RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF75DP51815 510 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 CETN1Q12798 172 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 NAB2Q15742 525 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 TAS1R2Q8TE23 839 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 SLC38A7Q9NVC3 462 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 KANSL3Q9P2N6 904 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 COQ4Q9Y3A0 265 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 PDCD11Q14690 1871 aaKnown RBP22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 CEP290O15078 2479 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 GTPBP10A4D1E9 387 aaKnown RBP22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 XPOTO43592 962 aaKnown RBP22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 DGKIO75912 1065 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 ADCY5O95622 1261 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 RGS19P49795 217 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 SOX4Q06945 474 aaPredicted RBP22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 KCNMA1Q12791 1236 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 FAM117BQ6P1L5 589 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 FBXL13Q8NEE6 735 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 URGCPQ8TCY9 931 aa22.02■■□□□ 1.12
CDC42SE2-206ENST00000503291 LRRN2O75325 713 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 VNN1O95497 513 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 CYP3A5P20815 502 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 GRIK3Q13003 919 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 EXOC3L4Q17RC7 722 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 GBP6Q6ZN66 633 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 ERGIC2Q96RQ1 377 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 GOLGA2P5Q9HBQ8 144 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 RAB20Q9NX57 234 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 ITGB3P05106 788 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 SYCP1Q15431 976 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 EPC2Q52LR7 807 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 CXorf38Q8TB03 319 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 SEMA4DQ92854 862 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 TBC1D13Q9NVG8 400 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 GCNT4Q9P109 453 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 SIX4Q9UIU6 781 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 ITGA11Q9UKX5 1188 aa22.01■■□□□ 1.11
CDC42SE2-206ENST00000503291 TBKBP1A7MCY6 615 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 HLA-DRAP01903 254 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 KRT19P08727 400 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 SLC9A1P19634 815 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 TRPC3Q13507 836 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 NCOA4Q13772 614 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 LMO3Q8TAP4 145 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 MRFAP1L1Q96HT8 127 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 SLC4A7Q9Y6M7 1214 aa22■■□□□ 1.11
CDC42SE2-206ENST00000503291 TDRD15B5MCY1 1934 aaKnown RBP21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 H0YGN5 161 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 CAPN15O75808 1086 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 PON1P27169 355 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 PBX1P40424 430 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 PIK3CAP42336 1068 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 RNASELQ05823 741 aaKnown RBP21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 ZNF280BQ86YH2 543 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 EHBP1Q8NDI1 1231 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 MTIF3Q9H2K0 278 aaKnown RBP21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 SIK3Q9Y2K2 1263 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 TNRC18O15417 2968 aaPredicted RBP21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 A0A1W2PQC6 194 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 DDHD2O94830 711 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 POLR2BP30876 1174 aaKnown RBP21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 KLK7P49862 253 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 RBP5P82980 135 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 C9orf50Q5SZB4 431 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 RSPH1Q8WYR4 309 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 PCMTD1Q96MG8 357 aaPredicted RBP21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.99■■□□□ 1.114e-8■■■■■ 61.6
CDC42SE2-206ENST00000503291 AGAP1Q9UPQ3 857 aa21.99■■□□□ 1.11
CDC42SE2-206ENST00000503291 MYL6P60660 151 aa21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 TUSC3Q13454 348 aa21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 PAN2Q504Q3 1202 aaKnown RBP21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 C9orf57Q5W0N0 161 aa21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 ZNF689Q96CS4 500 aaPredicted RBP21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 PI4K2AQ9BTU6 479 aa21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 CACNG4Q9UBN1 327 aa21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 R3HCC1Q9Y3T6 440 aaKnown RBP21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 FNDC1Q4ZHG4 1894 aaPredicted RBP21.98■■□□□ 1.11
CDC42SE2-206ENST00000503291 ANO9A1A5B4 782 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 LRPAP1P30533 357 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 RASIP1Q5U651 963 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 TRIM65Q6PJ69 517 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 ELMO3Q96BJ8 720 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 MRPL9Q9BYD2 267 aaKnown RBP21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 INTS2Q9H0H0 1204 aaKnown RBP21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 PTPRSQ13332 1948 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 CASTOR2A6NHX0 329 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 PIRO00625 290 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 PPEF2O14830 753 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 B4GALT3O60512 393 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 GJB5O95377 273 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 DSC1Q08554 894 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 SHHQ15465 462 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 SGSM1Q2NKQ1 1148 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 PHOSPHO2Q8TCD6 241 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 FAM193BQ96PV7 902 aaPredicted RBP21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 SLC9A7Q96T83 725 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 GDF15Q99988 308 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 PAAF1Q9BRP4 392 aa21.97■■□□□ 1.11
CDC42SE2-206ENST00000503291 LAMA2P24043 3122 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms