RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 SNRPA1P09661 255 aaKnown RBP5.85□□□□□ -1.47
CPNE4-203ENST00000503204 FAM163BP0C2L3 166 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 SREBF1P36956 1147 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 ZNF280AP59817 542 aaPredicted RBP5.85□□□□□ -1.47
CPNE4-203ENST00000503204 GBX1Q14549 363 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 NOMO1Q15155 1222 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 MINDY4Q4G0A6 757 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 ANKS6Q68DC2 871 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 TOGARAM2Q6ZUX3 1019 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 TPH2Q8IWU9 490 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 SMAP1Q8IYB5 467 aaPredicted RBP5.85□□□□□ -1.47
CPNE4-203ENST00000503204 PQLC1Q8N2U9 271 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 CBARPQ8N350 705 aaPredicted RBP5.85□□□□□ -1.47
CPNE4-203ENST00000503204 AMER2Q8N7J2 671 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.85□□□□□ -1.47
CPNE4-203ENST00000503204 OR10H5Q8NGA6 315 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 ZFP28Q8NHY6 868 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 TFAP2CQ92754 450 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 ELAC2Q9BQ52 826 aaKnown RBP5.85□□□□□ -1.47
CPNE4-203ENST00000503204 ZHX3Q9H4I2 956 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 SLC2A4RGQ9NR83 387 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 LANCL2Q9NS86 450 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 MOCS1Q9NZB8 636 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 PCDHGA2Q9Y5H1 932 aa5.85□□□□□ -1.47
CPNE4-203ENST00000503204 DCAF1Q9Y4B6 1507 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 ZNF500O60304 480 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 SLPIP03973 132 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 RBP3P10745 1247 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 IL2RBP14784 551 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 GSPT1P15170 499 aaKnown RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 ALOX15P16050 662 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 SERPINB3P29508 390 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 APOBEC3AP31941 199 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 CLRN1P58418 232 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 KLF10Q13118 480 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 CLUL1Q15846 466 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 CCDC70Q6NSX1 233 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 PGM2L1Q6PCE3 622 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 SYNE4Q8N205 404 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 C1orf162Q8NEQ5 155 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 REPS2Q8NFH8 660 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 HAS1Q92839 578 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 LENG9Q96B70 501 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 SLC46A2Q9BY10 475 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 SLC13A1Q9BZW2 595 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 NRDE2Q9H7Z3 1164 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 GPRC5BQ9NZH0 403 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 LUZP4Q9P127 313 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 POGKQ9P215 609 aa5.84□□□□□ -1.47
CPNE4-203ENST00000503204 PNMA8BQ9ULN7 279 aaPredicted RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 LUC7L2Q9Y383 392 aaKnown RBP5.84□□□□□ -1.47
CPNE4-203ENST00000503204 ATRNL1Q5VV63 1379 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 CXorf49A8MYA2 514 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 CCER2I3L3R5 266 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 APAF1O14727 1248 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 GUCY1A2P33402 732 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 IARSP41252 1262 aaKnown RBP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 SIM2Q14190 667 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 FHL2Q14192 279 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 KRT72Q14CN4 511 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 SAFBQ15424 915 aaKnown RBP eCLIP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 CSRP2Q16527 193 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 PTPN21Q16825 1174 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 ALFQ53S48 1182 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 RRP12Q5JTH9 1297 aaKnown RBP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 ANO1Q5XXA6 986 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 ZNF280DQ6N043 979 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 CPXCR1Q8N123 301 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 ANKRD42Q8N9B4 389 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 GJA10Q969M2 543 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 CLIP3Q96DZ5 547 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 CYFIP2Q96F07 1278 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 HERPUD2Q9BSE4 406 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 SENP6Q9GZR1 1112 aaPredicted RBP5.83□□□□□ -1.48
CPNE4-203ENST00000503204 AS3MTQ9HBK9 375 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 TMEM140Q9NV12 185 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 MKS1Q9NXB0 559 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 FZD1Q9UP38 647 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 DNM3Q9UQ16 869 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 ANKRD6Q9Y2G4 727 aa5.83□□□□□ -1.48
CPNE4-203ENST00000503204 GAGE12BA1L429 117 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 GAGE12HA6NDE8 117 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 AHRRA9YTQ3 701 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 TEX33O43247 280 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 RPS6KA4O75676 772 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 CT47B1P0C2W7 299 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-203ENST00000503204 KRT85P78386 507 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 NHLH2Q02577 135 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 COBLL1Q53SF7 1204 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 ATXN7L2Q5T6C5 722 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-203ENST00000503204 CYB5RLQ6IPT4 315 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 RHOUQ7L0Q8 258 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 EPM2AIP1Q7L775 607 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-203ENST00000503204 GDF7Q7Z4P5 450 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 SLC35B2Q8TB61 432 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 NEU4Q8WWR8 484 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-203ENST00000503204 CASKIN2Q8WXE0 1202 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 FAXDC2Q96IV6 333 aa5.82□□□□□ -1.48
CPNE4-203ENST00000503204 SLC2A13Q96QE2 648 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms