RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 SLC29A2Q14542 456 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 CRELD2Q6UXH1 353 aaPredicted RBP17.68■□□□□ 0.42
VCAN-204ENST00000502527 MSTO1Q9BUK6 570 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 SEMA4AQ9H3S1 761 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 LRRC4CQ9HCJ2 640 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 AFG3L2Q9Y4W6 797 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 KIAA1217Q5T5P2 1943 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 VNN1O95497 513 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 ACO1P21399 889 aaKnown RBP17.68■□□□□ 0.42
VCAN-204ENST00000502527 RFC5P40937 340 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 ADCY2Q08462 1091 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 NOL9Q5SY16 702 aaKnown RBP17.68■□□□□ 0.42
VCAN-204ENST00000502527 C6orf118Q5T5N4 469 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 PPP1R2P3Q6NXS1 205 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 SYDE1Q6ZW31 735 aaPredicted RBP17.68■□□□□ 0.42
VCAN-204ENST00000502527 CYFIP2Q96F07 1278 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 TMEM109Q9BVC6 243 aa17.68■□□□□ 0.42
VCAN-204ENST00000502527 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 PROSCO94903 275 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 WNT7BP56706 349 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 PTP4A2Q12974 167 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 SPOPLQ6IQ16 392 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 MON1BQ7L1V2 547 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 YTHDF3Q7Z739 585 aaKnown RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 C1orf54Q8WWF1 131 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 ZBTB45Q96K62 511 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 CGRRF1Q99675 332 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 HAPLN2Q9GZV7 340 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 TMEM134Q9H6X4 195 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 WHRNQ9P202 907 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 PPP1R1BQ9UD71 204 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 PCDHB4Q9Y5E5 795 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 WDR81Q562E7 1941 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 PTPRJQ12913 1337 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 IGKV6D-21A0A0A0MT36 114 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 A0A0B4J269 797 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 RGS16O15492 202 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 CPP00450 1065 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 KRT17Q04695 432 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 ABRAQ8N0Z2 381 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 OTUD6BQ8N6M0 293 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 GRK7Q8WTQ7 553 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 RAPGEF5Q92565 580 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 CENPTQ96BT3 561 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 VCPIP1Q96JH7 1222 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 TARS2Q9BW92 718 aaKnown RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 TRIM7Q9C029 511 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 STMN4Q9H169 189 aaPredicted RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 MRPL47Q9HD33 250 aaKnown RBP17.67■□□□□ 0.42
VCAN-204ENST00000502527 NRBP2Q9NSY0 501 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
VCAN-204ENST00000502527 TLDC2A0PJX2 215 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 RIPK2O43353 540 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 CLTAP09496 248 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 ITIH2P19823 946 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 SH3D19Q5HYK7 790 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 TRMT10CQ7L0Y3 403 aaKnown RBP17.66■□□□□ 0.42
VCAN-204ENST00000502527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.66■□□□□ 0.42
VCAN-204ENST00000502527 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 APOBEC3GQ9HC16 384 aaKnown RBP17.66■□□□□ 0.42
VCAN-204ENST00000502527 FBXO40Q9UH90 709 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 ZNF541Q9H0D2 1346 aa17.66■□□□□ 0.42
VCAN-204ENST00000502527 AGTP01019 485 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 GNA15P30679 374 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 CNTN2Q02246 1040 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 TTC31Q49AM3 519 aaPredicted RBP17.65■□□□□ 0.42
VCAN-204ENST00000502527 TMEM270Q6UE05 265 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 PHLDB2Q86SQ0 1253 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 MICALL1Q8N3F8 863 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.65■□□□□ 0.42
VCAN-204ENST00000502527 DDX27Q96GQ7 796 aaKnown RBP17.65■□□□□ 0.42
VCAN-204ENST00000502527 HOMER3Q9NSC5 361 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 ADAM22Q9P0K1 906 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 CNTN6Q9UQ52 1028 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 PSTPIP1O43586 416 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 GAS8O95995 478 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 FGFR4P22455 802 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 LIG3P49916 1009 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 ALDH5A1P51649 535 aaPredicted RBP17.65■□□□□ 0.42
VCAN-204ENST00000502527 NOMO3P69849 1222 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 SNX1Q13596 522 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 LLGL1Q15334 1064 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 PHF13Q86YI8 300 aaPredicted RBP17.65■□□□□ 0.42
VCAN-204ENST00000502527 AZI2Q9H6S1 392 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 ASIC3Q9UHC3 531 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 SCINQ9Y6U3 715 aa17.65■□□□□ 0.42
VCAN-204ENST00000502527 ADGRA2Q96PE1 1338 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 NOP14P78316 857 aaKnown RBP17.64■□□□□ 0.41
VCAN-204ENST00000502527 FSTL1Q12841 308 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 PTK6Q13882 451 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 ZBTB41Q5SVQ8 909 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 FAM160B1Q5W0V3 765 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 RHOT1Q8IXI2 618 aa17.64■□□□□ 0.41
VCAN-204ENST00000502527 RBBP8NLQ8NC74 664 aaPredicted RBP17.64■□□□□ 0.41
VCAN-204ENST00000502527 SNF8Q96H20 258 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms