RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 TUSC3Q13454 348 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 BIRC3Q13489 604 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 GRIN2CQ14957 1233 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 RAB30Q15771 203 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 DUOXA2Q1HG44 320 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 LUZP1Q86V48 1076 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 FAM200AQ8TCP9 573 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 ZMAT2Q96NC0 199 aaKnown RBP12.38□□□□□ -0.43
CTTN-208ENST00000498223 NKX2-4Q9H2Z4 354 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 AAASQ9NRG9 546 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 INTS13Q9NVM9 706 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 DPP3Q9NY33 737 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 TUBGCP4Q9UGJ1 667 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 PLAGL2Q9UPG8 496 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
CTTN-208ENST00000498223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTTN-208ENST00000498223 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
CTTN-208ENST00000498223 LRRIQ3A6PVS8 624 aaPredicted RBP12.37□□□□□ -0.43
CTTN-208ENST00000498223 INPPL1O15357 1258 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 DDHD2O94830 711 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 ALDH2P05091 517 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 LAG3P18627 525 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 GUCY2FP51841 1108 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 AP3M2P53677 418 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 DLG4P78352 724 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 TRPC3Q13507 836 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 XKR4Q5GH76 650 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 DHX40Q8IX18 779 aaKnown RBP12.37□□□□□ -0.43
CTTN-208ENST00000498223 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 GSTCDQ8NEC7 633 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 RABGGTAQ92696 567 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 FAM84AQ96KN4 292 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 ZNF558Q96NG5 402 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 PPP1R10Q96QC0 940 aaKnown RBP12.37□□□□□ -0.43
CTTN-208ENST00000498223 COLEC11Q9BWP8 271 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 MTMR12Q9C0I1 747 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 GOLGA2P5Q9HBQ8 144 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 CACNG4Q9UBN1 327 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 DNAJB4Q9UDY4 337 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 PRG3Q9Y2Y8 225 aaPredicted RBP12.37□□□□□ -0.43
CTTN-208ENST00000498223 PCDHB12Q9Y5F1 795 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
CTTN-208ENST00000498223 COL4A6Q14031 1691 aa12.37□□□□□ -0.43
CTTN-208ENST00000498223 LCHNA4D1U4 455 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 ITGB3P05106 788 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 CA3P07451 260 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 CYP3A5P20815 502 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 CTNNB1P35222 781 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 GCLMP48507 274 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 BCAR1P56945 870 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
CTTN-208ENST00000498223 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 PLEKHO2Q8TD55 490 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
CTTN-208ENST00000498223 UROC1Q96N76 676 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 TMEM175Q9BSA9 504 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 CWH43Q9H720 699 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 SLC28A3Q9HAS3 691 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 RC3H2Q9HBD1 1191 aaKnown RBP12.36□□□□□ -0.43
CTTN-208ENST00000498223 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 AGAP1Q9UPQ3 857 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 YBX2Q9Y2T7 364 aaKnown RBP12.36□□□□□ -0.43
CTTN-208ENST00000498223 RWDD3Q9Y3V2 267 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 MYH10P35580 1976 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
CTTN-208ENST00000498223 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 NT5C1B-RDH14C9J2C7 533 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 PODXLO00592 558 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 NRP1O14786 923 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
CTTN-208ENST00000498223 AFPP02771 609 aaKnown RBP12.35□□□□□ -0.43
CTTN-208ENST00000498223 EEF1GP26641 437 aaKnown RBP12.35□□□□□ -0.43
CTTN-208ENST00000498223 POLR2BP30876 1174 aaKnown RBP12.35□□□□□ -0.43
CTTN-208ENST00000498223 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
CTTN-208ENST00000498223 PBX3P40426 434 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 PIK3CAP42336 1068 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 SLC11A1P49279 550 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 MXI1P50539 228 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 CLCNKBP51801 687 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 ENPEPQ07075 957 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 DSC1Q08554 894 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 CETN1Q12798 172 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 NCAPHQ15003 741 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 IQCB1Q15051 598 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 ZBTB6Q15916 424 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 MAN2A1Q16706 1144 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 KCNT2Q6UVM3 1135 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
CTTN-208ENST00000498223 IRF2BP1Q8IU81 584 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms