RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PATL1Q86TB9 770 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 GTF2IRD2Q86UP8 949 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NBPF5PQ86XG9 351 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 KRTAP1-3Q8IUG1 177 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FMNL3Q8IVF7 1028 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 HIPK4Q8NE63 616 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 OR56A4Q8NGH8 313 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CFAP53Q96M91 514 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CRBNQ96SW2 442 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZIC5Q96T25 663 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GSDMCQ9BYG8 508 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PLEKHA3Q9HB20 300 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FANCEQ9HB96 536 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 LUC7LQ9NQ29 371 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 IARS2Q9NSE4 1012 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZNF224Q9NZL3 707 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 COL20A1Q9P218 1284 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RAP2CQ9Y3L5 183 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 HEMK1Q9Y5R4 338 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 MYO7AQ13402 2215 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SBNO1A3KN83 1393 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PCNX1Q96RV3 2341 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ESYT2A0FGR8 921 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GOLIM4O00461 696 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SYN3O14994 580 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 HYAL3O43820 417 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 GNAI2P04899 355 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PRPS1L1P21108 318 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CD9P21926 228 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TYK2P29597 1187 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 VCPP55072 806 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 EVCP57679 992 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NLRP5P59047 1200 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ACTA1P68133 377 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 XPCQ01831 940 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 LRP8Q14114 963 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZNF268Q14587 947 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 SF1Q15637 639 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 USP41Q3LFD5 358 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 C4orf17Q53FE4 359 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FRRS1Q6ZNA5 592 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TMPPEQ6ZT21 453 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NCCRP1Q6ZVX7 275 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 HAUS6Q7Z4H7 955 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CHSY1Q86X52 802 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 DMRTC2Q8IXT2 367 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 C11orf65Q8NCR3 313 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SUPT20HQ8NEM7 779 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FEZF2Q8TBJ5 459 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 BRSK1Q8TDC3 778 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PSPC1Q8WXF1 523 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 JADE3Q92613 823 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 TMEM125Q96AQ2 219 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MSANTD3Q96H12 275 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 FAM118BQ9BPY3 351 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 WDR11Q9BZH6 1224 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 VPS11Q9H270 941 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 EPHX3Q9H6B9 360 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NARFLQ9H6Q4 476 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 SP140LQ9H930 580 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MYNNQ9NPC7 610 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MIS18AQ9NYP9 233 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 STOML1Q9UBI4 398 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ARPP21Q9UBL0 812 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 LPAR3Q9UBY5 353 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RCOR1Q9UKL0 485 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CNOT6Q9ULM6 557 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 DTNAQ9Y4J8 743 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CDY2AQ9Y6F7 541 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GNAT3A8MTJ3 354 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 KIF2AO00139 706 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 B4GALT4O60513 344 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 DDNO94850 711 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 RARAP10276 462 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ETS2P15036 469 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 MGAT1P26572 445 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 GTF2F1P35269 517 aaKnown RBP eCLIP1.57□□□□□ -2.16
XRN1-214ENST00000498077 RPL21P46778 160 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 RASGEF1BQ0VAM2 473 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 VEPH1Q14D04 833 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PTPAQ15257 358 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 CNGA3Q16281 694 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 AASDHQ4L235 1098 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 PLEKHO1Q53GL0 409 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 XKR4Q5GH76 650 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 NBPF12Q5TAG4 269 aaPredicted RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 TBC1D9BQ66K14 1250 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ANKRD34AQ69YU3 496 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 LIX1LQ8IVB5 337 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ATP6V0D2Q8N8Y2 350 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RFT1Q96AA3 541 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 JAKMIP2Q96AA8 810 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ACDQ96AP0 544 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 RRP36Q96EU6 259 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 MISP3Q96FF7 219 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 ZNF583Q96ND8 569 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 UHRF2Q96PU4 802 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PTPN18Q99952 460 aa1.57□□□□□ -2.16
XRN1-214ENST00000498077 PELOQ9BRX2 385 aaKnown RBP1.57□□□□□ -2.16
XRN1-214ENST00000498077 ERP44Q9BS26 406 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms